G1561306


Basic Information

Item Value
gene id G1561306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52411530 ~ 52413003 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1786205
gaagagagagagagacaaacgttatgatgaagagagagagacaaacgttatgatgaagagagggagagagagagacaaacgttatgatgaagagaggaagagagacagacaaacgttatgatgaagagagggagagagagagagagagacaaacgttatgatgaagagagggagagagagagacaaacgttatgatgaagagagggagagagagagacaaacgttatgatgaagagagggagagagagagacaaacgttatgatgaagagagggagagagagagagagacaaacgttatgatgaagagagggagagagagagaaacattatgaagaagagagggagagagagagacaaacatgatgaggagagagagagacaaacgttatgatgaagagagggagagagagagacaaacgttatgaagaagagagggagagagagagacaaacgttatgatgaagagagagagagagacaaacgt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1786205 True 485 lncRNA 0.43 2 52411530 52413003

Neighbor

gene id symbol gene type direction distance location
LOC110496491 LOC106588724 coding downstream 14552 52352725 ~ 52396978 (-)
LOC110496489 LOC106588773 coding downstream 59613 52331974 ~ 52351917 (-)
LOC110496488 LOC106588772 coding downstream 79969 52317137 ~ 52331561 (-)
LOC110519830 LOC106588776 coding downstream 129655 52271271 ~ 52281875 (-)
sytl1 LOC106588777 coding downstream 142212 52261367 ~ 52269318 (-)
sesn2 LOC106588768 coding upstream 15222 52428225 ~ 52436609 (-)
matn1 matn1 coding upstream 28103 52441106 ~ 52455251 (-)
LOC110496494 LOC106588766 coding upstream 49366 52462369 ~ 52472077 (-)
LOC118941185 sdc3 coding upstream 60207 52473210 ~ 52511642 (-)
pum1 pum1 coding upstream 101682 52514685 ~ 52551627 (-)
G1561239 NA non-coding downstream 61227 52347881 ~ 52350303 (-)
G1561233 NA non-coding downstream 100997 52310308 ~ 52310533 (-)
G1561230 NA non-coding downstream 103865 52307422 ~ 52307665 (-)
G1561290 NA non-coding upstream 196100 52609103 ~ 52612099 (-)
G1561366 NA non-coding upstream 219678 52632681 ~ 52635148 (-)
G1561367 NA non-coding upstream 220485 52633488 ~ 52634262 (-)
G1561285 NA non-coding upstream 227314 52640317 ~ 52641070 (-)
G1561368 NA non-coding upstream 235738 52648741 ~ 52648999 (-)
G1561167 NA other downstream 161041 52249354 ~ 52250489 (-)
trak1b LOC106588779 other downstream 228323 52179320 ~ 52240648 (-)
G1560339 NA other downstream 956245 51381731 ~ 51455285 (-)
LOC110496463 LOC106588703 other downstream 1197386 51213151 ~ 51214398 (-)
G1561279 NA other upstream 231986 52644989 ~ 52647777 (-)
G1562762 NA other upstream 1185647 53598650 ~ 53602694 (-)
tomm7 NA other upstream 1208897 53621900 ~ 53628443 (-)
G1562816 LOC100136012 other upstream 1339403 53752406 ~ 53752683 (-)
G1562828 NA other upstream 1461407 53874410 ~ 53875592 (-)

Expression


Co-expression Network