Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561367 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 52633488 ~ 52634262 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1786269 | True | 211 | lncRNA | 0.55 | 2 | 52633488 | 52634262 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fabp3 | LOC100136763 | coding | downstream | 58287 | 52571332 ~ 52575201 (-) |
| snrnp40 | LOC106588762 | coding | downstream | 69749 | 52558640 ~ 52563739 (-) |
| nkain1 | nkain1 | coding | downstream | 75835 | 52552468 ~ 52557653 (-) |
| pum1 | pum1 | coding | downstream | 81861 | 52514685 ~ 52551627 (-) |
| LOC118941185 | sdc3 | coding | downstream | 121846 | 52473210 ~ 52511642 (-) |
| arpp21 | LOC106588747 | coding | upstream | 15609 | 52649871 ~ 52672721 (-) |
| LOC110496501 | pdcd6ip | coding | upstream | 43159 | 52677421 ~ 52704871 (-) |
| ubp1 | LOC106588748 | coding | upstream | 78291 | 52712553 ~ 52728916 (-) |
| clasp2 | clasp2 | coding | upstream | 97247 | 52731509 ~ 52824972 (-) |
| fbxl2 | LOC106588753 | coding | upstream | 204002 | 52838264 ~ 52858741 (-) |
| G1561290 | NA | non-coding | downstream | 21389 | 52609103 ~ 52612099 (-) |
| G1561306 | NA | non-coding | downstream | 220485 | 52411530 ~ 52413003 (-) |
| G1561305 | NA | non-coding | downstream | 221108 | 52411046 ~ 52412380 (-) |
| LOC110496491 | LOC106588724 | non-coding | downstream | 236893 | 52352725 ~ 52396978 (-) |
| G1561239 | NA | non-coding | downstream | 283185 | 52347881 ~ 52350303 (-) |
| G1561285 | NA | non-coding | upstream | 6055 | 52640317 ~ 52641070 (-) |
| G1561368 | NA | non-coding | upstream | 14479 | 52648741 ~ 52648999 (-) |
| G1561369 | NA | non-coding | upstream | 20512 | 52654774 ~ 52656142 (-) |
| G1561375 | NA | non-coding | upstream | 37495 | 52671757 ~ 52672081 (-) |
| G1561378 | NA | non-coding | upstream | 40688 | 52674950 ~ 52675170 (-) |
| G1561167 | NA | other | downstream | 382999 | 52249354 ~ 52250489 (-) |
| trak1b | LOC106588779 | other | downstream | 450281 | 52179320 ~ 52240648 (-) |
| G1560339 | NA | other | downstream | 1178203 | 51381731 ~ 51455285 (-) |
| LOC110496463 | LOC106588703 | other | downstream | 1419344 | 51213151 ~ 51214398 (-) |
| G1561279 | NA | other | upstream | 10727 | 52644989 ~ 52647777 (-) |
| G1562762 | NA | other | upstream | 964388 | 53598650 ~ 53602694 (-) |
| tomm7 | NA | other | upstream | 987638 | 53621900 ~ 53628443 (-) |
| G1562816 | LOC100136012 | other | upstream | 1118144 | 53752406 ~ 53752683 (-) |
| G1562828 | NA | other | upstream | 1240148 | 53874410 ~ 53875592 (-) |
