G1561285


Basic Information

Item Value
gene id G1561285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52640317 ~ 52641070 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1786181
CCAGAAATGGCCAGACACATCATGCTACCAGAAAACCCTTGGTTGACCCTGCCCTTGCACAATATACACTGTGCAAATCATGAAGAACACCTTGTAATATTGTGTTGTACTTGTActcctccttttgccctcagaacagcctcaatttgttggggcatggactctacaaggtgtcaaaagcgttacGTGGCGATGCTGGCATATGTTCAATGCGTCacacggttgtgtcaagttggctggatgttctttgggtggtggaccattcttgatacacacgggaaactgttgagcgtgaaagaCCAAGGTgtgttgcaattcttgacacattcaaaccagtgtgcctggcacctagtaccataggccgttcaaaggcactcaaatattctgtcttgtccattcaccccctgaatggcacacatacacaattcatgtctcaaggcttaaacatccttatttaacctgtcccctccccttcatctacattggtTTAACAAGTGtcctcaataagggatcaaagcttccacctggattcacctggtcagtctatgtcatggaaagagcaggtgttcttaatgttttgtacacacagtgtaGGCTAGCCTACAAACAGTGCTAACAATAGGCCTATCCTTCATTTGTCAAATGATGTAGGCTAATAGACTGATACATTCAGTGATAGGCCACCCCCAGAGGACCCAGTTTTTGTGATCTTGTTAAGGATCATTACACTGTTATTACACTATTTGGTCACTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1786181 True 754 lncRNA 0.44 1 52640317 52641070

Neighbor

gene id symbol gene type direction distance location
arhgap4b LOC100380863 coding downstream 2582 52606702 ~ 52637735 (-)
fabp3 LOC100136763 coding downstream 65116 52571332 ~ 52575201 (-)
snrnp40 LOC106588762 coding downstream 76578 52558640 ~ 52563739 (-)
nkain1 nkain1 coding downstream 82664 52552468 ~ 52557653 (-)
pum1 pum1 coding downstream 88690 52514685 ~ 52551627 (-)
arpp21 LOC106588747 coding upstream 8801 52649871 ~ 52672721 (-)
LOC110496501 pdcd6ip coding upstream 36351 52677421 ~ 52704871 (-)
ubp1 LOC106588748 coding upstream 71483 52712553 ~ 52728916 (-)
clasp2 clasp2 coding upstream 90439 52731509 ~ 52824972 (-)
fbxl2 LOC106588753 coding upstream 197194 52838264 ~ 52858741 (-)
G1561366 NA non-coding downstream 5169 52632681 ~ 52635148 (-)
G1561367 NA non-coding downstream 6055 52633488 ~ 52634262 (-)
G1561290 NA non-coding downstream 28218 52609103 ~ 52612099 (-)
G1561306 NA non-coding downstream 227314 52411530 ~ 52413003 (-)
G1561305 NA non-coding downstream 227937 52411046 ~ 52412380 (-)
G1561368 NA non-coding upstream 7671 52648741 ~ 52648999 (-)
G1561369 NA non-coding upstream 13704 52654774 ~ 52656142 (-)
G1561375 NA non-coding upstream 30687 52671757 ~ 52672081 (-)
G1561378 NA non-coding upstream 33880 52674950 ~ 52675170 (-)
G1561288 NA non-coding upstream 34679 52675749 ~ 52740009 (-)
LOC110496491 LOC106588724 other downstream 283007 52352725 ~ 52396978 (-)
G1561167 NA other downstream 389828 52249354 ~ 52250489 (-)
trak1b LOC106588779 other downstream 457110 52179320 ~ 52240648 (-)
G1560339 NA other downstream 1185032 51381731 ~ 51455285 (-)
LOC110496463 LOC106588703 other downstream 1426173 51213151 ~ 51214398 (-)
G1561279 NA other upstream 3919 52644989 ~ 52647777 (-)
G1562762 NA other upstream 957580 53598650 ~ 53602694 (-)
tomm7 NA other upstream 980830 53621900 ~ 53628443 (-)
G1562816 LOC100136012 other upstream 1111336 53752406 ~ 53752683 (-)
G1562828 NA other upstream 1233340 53874410 ~ 53875592 (-)

Expression


Co-expression Network