Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561068 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 52759813 ~ 52760263 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: CLIP-associating protein 2 isoform X30 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1785942 | True | 382 | lncRNA | 0.57 | 2 | 52759813 | 52760263 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cyhr1 | LOC106588755 | coding | upstream | 114994 | 52641237 ~ 52644819 (+) |
| dclk3 | LOC106588742 | coding | upstream | 153158 | 52600385 ~ 52606655 (+) |
| zcchc17 | zcchc17 | coding | upstream | 189533 | 52563530 ~ 52570280 (+) |
| LOC110496490 | NA | coding | upstream | 414145 | 52340281 ~ 52345668 (+) |
| LOC110496487 | LOC106588732 | coding | upstream | 462593 | 52294668 ~ 52297220 (+) |
| susd5 | LOC106588743 | coding | downstream | 102417 | 52862680 ~ 52892459 (+) |
| fkbp9 | LOC106588749 | coding | downstream | 146136 | 52906399 ~ 52918381 (+) |
| si:ch211-199g17.2 | LOC106588746 | coding | downstream | 265153 | 52996763 ~ 53051271 (+) |
| LOC110496510 | LOC106588740 | coding | downstream | 316766 | 53077029 ~ 53109904 (+) |
| LOC118941187 | NA | coding | downstream | 361849 | 53122112 ~ 53128537 (+) |
| G1561019 | clasp2 | non-coding | upstream | 8890 | 52746296 ~ 52750923 (+) |
| G1561062 | pdcd6ip | non-coding | upstream | 72655 | 52686648 ~ 52687158 (+) |
| G1561059 | NA | non-coding | upstream | 87078 | 52672425 ~ 52672735 (+) |
| G1561004 | NA | non-coding | upstream | 112036 | 52644960 ~ 52647777 (+) |
| G1561006 | NA | non-coding | upstream | 151815 | 52571198 ~ 52607998 (+) |
| G1561125 | NA | non-coding | downstream | 59551 | 52819814 ~ 52820364 (+) |
| G1561420 | NA | non-coding | downstream | 65507 | 52825770 ~ 52826047 (+) |
| G1561421 | NA | non-coding | downstream | 65952 | 52826215 ~ 52826631 (+) |
| G1561422 | NA | non-coding | downstream | 66876 | 52827139 ~ 52842388 (+) |
| G1561429 | NA | non-coding | downstream | 104617 | 52864880 ~ 52896411 (+) |
| G1560957 | NA | other | upstream | 317872 | 52441146 ~ 52441941 (+) |
| G1560911 | NA | other | upstream | 403978 | 52355297 ~ 52355835 (+) |
| G1560811 | LOC100846955 | other | upstream | 502283 | 52256636 ~ 52257530 (+) |
| LOC110496482 | LOC106588780 | other | upstream | 685784 | 52036488 ~ 52083470 (+) |
| G1559041 | thsd7a | other | upstream | 2124247 | 50633743 ~ 50635566 (+) |
| snrpd1 | snrpd1 | other | downstream | 415459 | 53175661 ~ 53178938 (+) |
| G1561544 | LOC106588750 | other | downstream | 517527 | 53277790 ~ 53288465 (+) |
| LOC110514975 | LOC106588804 | other | downstream | 958106 | 53713836 ~ 53730416 (+) |
| G1561845 | NA | other | downstream | 1056901 | 53817164 ~ 53840871 (+) |
| G1561856 | NA | other | downstream | 1111910 | 53872173 ~ 53876930 (+) |
