Gene
RNA
| Item | Value |
|---|---|
| gene id | G1562568 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53116542 ~ 53116769 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1787805 | True | 228 | lncRNA | 0.51 | 1 | 53116542 | 53116769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496850 | LOC106588723 | coding | downstream | 101244 | 52918684 ~ 53015298 (-) |
| LOC110496507 | LOC106588754 | coding | downstream | 210728 | 52900671 ~ 52905814 (-) |
| fbxl2 | LOC106588753 | coding | downstream | 257801 | 52838264 ~ 52858741 (-) |
| clasp2 | clasp2 | coding | downstream | 291570 | 52731509 ~ 52824972 (-) |
| ubp1 | LOC106588748 | coding | downstream | 387626 | 52712553 ~ 52728916 (-) |
| LOC110496514 | LOC106588757 | coding | upstream | 66574 | 53183343 ~ 53187737 (-) |
| mturn | LOC106588759 | coding | upstream | 71306 | 53188075 ~ 53195009 (-) |
| LOC110496518 | LOC106588741 | coding | upstream | 175644 | 53292413 ~ 53350447 (-) |
| snx13 | LOC106588736 | coding | upstream | 240960 | 53357729 ~ 53385541 (-) |
| LOC110496947 | LOC106588730 | coding | upstream | 275917 | 53392686 ~ 53395229 (-) |
| G1562567 | NA | non-coding | downstream | 881 | 53112224 ~ 53115661 (-) |
| G1562566 | NA | non-coding | downstream | 6773 | 53107984 ~ 53109769 (-) |
| G1562554 | NA | non-coding | downstream | 17829 | 53097964 ~ 53098713 (-) |
| G1562450 | LOC106588746 | non-coding | downstream | 31606 | 52996656 ~ 53084936 (-) |
| G1562458 | NA | non-coding | downstream | 76920 | 53036388 ~ 53039622 (-) |
| G1562576 | NA | non-coding | upstream | 24869 | 53141638 ~ 53146920 (-) |
| G1562522 | snrpd1 | non-coding | upstream | 58939 | 53175708 ~ 53178935 (-) |
| G1562519 | NA | non-coding | upstream | 162732 | 53279501 ~ 53288523 (-) |
| G1562623 | NA | non-coding | upstream | 215005 | 53331774 ~ 53339630 (-) |
| G1562624 | NA | non-coding | upstream | 236972 | 53353741 ~ 53394476 (-) |
| G1561279 | NA | other | downstream | 468765 | 52644989 ~ 52647777 (-) |
| LOC110496491 | LOC106588724 | other | downstream | 759232 | 52352725 ~ 52396978 (-) |
| G1561167 | NA | other | downstream | 866053 | 52249354 ~ 52250489 (-) |
| trak1b | LOC106588779 | other | downstream | 933335 | 52179320 ~ 52240648 (-) |
| G1560339 | NA | other | downstream | 1661257 | 51381731 ~ 51455285 (-) |
| G1562762 | NA | other | upstream | 481881 | 53598650 ~ 53602694 (-) |
| tomm7 | NA | other | upstream | 505131 | 53621900 ~ 53628443 (-) |
| G1562816 | LOC100136012 | other | upstream | 635637 | 53752406 ~ 53752683 (-) |
| G1562828 | NA | other | upstream | 757641 | 53874410 ~ 53875592 (-) |
| mrpl3 | mrpl3 | other | upstream | 772940 | 53887137 ~ 53895002 (-) |
