Item | Value |
---|---|
gene id | G1561792 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 53601291 ~ 53602252 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1786847 | True | 205 | lncRNA | 0.53 | 2 | 53601291 | 53602252 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
itgb8 | LOC106588794 | coding | upstream | 86317 | 53497721 ~ 53514974 (+) |
LOC110496948 | NA | coding | upstream | 194786 | 53404665 ~ 53406505 (+) |
LOC110496519 | LOC106588750 | coding | upstream | 294165 | 53277785 ~ 53307126 (+) |
LOC110496851 | LOC106588750 | coding | upstream | 312666 | 53287015 ~ 53288625 (+) |
sh3bp5a | LOC106588751 | coding | upstream | 326235 | 53198538 ~ 53275056 (+) |
LOC110496949 | LOC106588787 | coding | downstream | 16570 | 53618822 ~ 53621390 (+) |
klhl7 | klhl7 | coding | downstream | 53974 | 53656226 ~ 53663553 (+) |
LOC110496530 | LOC106588804 | coding | downstream | 73241 | 53675493 ~ 53703310 (+) |
LOC110514975 | LOC106588804 | coding | downstream | 111584 | 53713836 ~ 53730416 (+) |
LOC110519664 | LOC106588805 | coding | downstream | 209831 | 53812083 ~ 53882492 (+) |
G1561769 | NA | non-coding | upstream | 13939 | 53586370 ~ 53587352 (+) |
G1561745 | LOC106588797 | non-coding | upstream | 47699 | 53553298 ~ 53553592 (+) |
G1561739 | NA | non-coding | upstream | 59518 | 53539774 ~ 53541773 (+) |
G1561712 | NA | non-coding | upstream | 76944 | 53521464 ~ 53524347 (+) |
G1561723 | NA | non-coding | upstream | 105577 | 53495397 ~ 53495714 (+) |
G1561788 | NA | non-coding | downstream | 40972 | 53643224 ~ 53649838 (+) |
G1561816 | LOC106588788 | non-coding | downstream | 51970 | 53654222 ~ 53655575 (+) |
G1561834 | NA | non-coding | downstream | 119053 | 53721305 ~ 53721808 (+) |
G1561837 | NA | non-coding | downstream | 129637 | 53731889 ~ 53732113 (+) |
G1561544 | LOC106588750 | other | upstream | 312826 | 53277790 ~ 53288465 (+) |
snrpd1 | snrpd1 | other | upstream | 422354 | 53175661 ~ 53178938 (+) |
G1560957 | NA | other | upstream | 1159350 | 52441146 ~ 52441941 (+) |
G1560911 | NA | other | upstream | 1245456 | 52355297 ~ 52355835 (+) |
G1560811 | LOC100846955 | other | upstream | 1343761 | 52256636 ~ 52257530 (+) |
G1561845 | NA | other | downstream | 214912 | 53817164 ~ 53840871 (+) |
G1561856 | NA | other | downstream | 269921 | 53872173 ~ 53876930 (+) |
LOC110496545 | LOC106588816 | other | downstream | 907506 | 54412770 ~ 54510923 (+) |
G1563547 | NA | other | downstream | 1536396 | 55138648 ~ 55139231 (+) |