G1561792



Basic Information


Item Value
gene id G1561792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 53601291 ~ 53602252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1786847
ggagaagagagagcagtagagaggagaagagaaagcagtggagaggagaagagaaagcagtggagaggataggttagagcaggggagaggagaagaacaagcaggggagaggagaagagagagcagtggagaggagaagagagagcagtggagaggaggagaagaaagagcagtggagaggaagagaagagagagcagctgagag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1786847 True 205 lncRNA 0.53 2 53601291 53602252

Neighbor


gene id symbol gene type direction distance location
itgb8 LOC106588794 coding upstream 86317 53497721 ~ 53514974 (+)
LOC110496948 NA coding upstream 194786 53404665 ~ 53406505 (+)
LOC110496519 LOC106588750 coding upstream 294165 53277785 ~ 53307126 (+)
LOC110496851 LOC106588750 coding upstream 312666 53287015 ~ 53288625 (+)
sh3bp5a LOC106588751 coding upstream 326235 53198538 ~ 53275056 (+)
LOC110496949 LOC106588787 coding downstream 16570 53618822 ~ 53621390 (+)
klhl7 klhl7 coding downstream 53974 53656226 ~ 53663553 (+)
LOC110496530 LOC106588804 coding downstream 73241 53675493 ~ 53703310 (+)
LOC110514975 LOC106588804 coding downstream 111584 53713836 ~ 53730416 (+)
LOC110519664 LOC106588805 coding downstream 209831 53812083 ~ 53882492 (+)
G1561769 NA non-coding upstream 13939 53586370 ~ 53587352 (+)
G1561745 LOC106588797 non-coding upstream 47699 53553298 ~ 53553592 (+)
G1561739 NA non-coding upstream 59518 53539774 ~ 53541773 (+)
G1561712 NA non-coding upstream 76944 53521464 ~ 53524347 (+)
G1561723 NA non-coding upstream 105577 53495397 ~ 53495714 (+)
G1561788 NA non-coding downstream 40972 53643224 ~ 53649838 (+)
G1561816 LOC106588788 non-coding downstream 51970 53654222 ~ 53655575 (+)
G1561834 NA non-coding downstream 119053 53721305 ~ 53721808 (+)
G1561837 NA non-coding downstream 129637 53731889 ~ 53732113 (+)
G1561544 LOC106588750 other upstream 312826 53277790 ~ 53288465 (+)
snrpd1 snrpd1 other upstream 422354 53175661 ~ 53178938 (+)
G1560957 NA other upstream 1159350 52441146 ~ 52441941 (+)
G1560911 NA other upstream 1245456 52355297 ~ 52355835 (+)
G1560811 LOC100846955 other upstream 1343761 52256636 ~ 52257530 (+)
G1561845 NA other downstream 214912 53817164 ~ 53840871 (+)
G1561856 NA other downstream 269921 53872173 ~ 53876930 (+)
LOC110496545 LOC106588816 other downstream 907506 54412770 ~ 54510923 (+)
G1563547 NA other downstream 1536396 55138648 ~ 55139231 (+)

Expression



Co-expression Network