G1561855


Basic Information

Item Value
gene id G1561855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 53772491 ~ 53793857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1786925
ggaacagactaaaccaacagacggaggaacagactaaaccaacagagggaggaacagactaaaccaacagacggaggaacagactaaacctacagagggaggaacagactaaaccaacagagggaggaacagactaaaccagcagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagatggaggaacagactaaaccaacagatggaggaacagactaaaccaatagATGGAGGCACAGACTAAACCaatagatggaggaacagactaaaccaacagatggaggaacagacaaaacccgcagaggggggaacagactaaaccaacagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagagggaggaacagactaaaccaacagagggagaaacagactaaaccaacagagggaggaacagactaaaccaacagatggaggaacagactaaacaaacagatggaggaacagactaaaccaaacGAGGGAGGCACGGACTAAatcaacagagggaggaacagactaaaccaacagagggaggaacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1786925 True 681 lncRNA 0.47 2 53772491 53793857

Neighbor

gene id symbol gene type direction distance location
LOC110514975 LOC106588804 coding upstream 42075 53713836 ~ 53730416 (+)
LOC110496530 LOC106588804 coding upstream 69181 53675493 ~ 53703310 (+)
klhl7 klhl7 coding upstream 108938 53656226 ~ 53663553 (+)
LOC110496949 LOC106588787 coding upstream 151101 53618822 ~ 53621390 (+)
itgb8 LOC106588794 coding upstream 257517 53497721 ~ 53514974 (+)
LOC110519664 LOC106588805 coding downstream 18226 53812083 ~ 53882492 (+)
dync1li1 LOC106588808 coding downstream 122435 53916292 ~ 53928304 (+)
LOC110496857 LOC106588809 coding downstream 189780 53983637 ~ 54008038 (+)
gmpr gmpr coding downstream 228425 54022282 ~ 54036714 (+)
LOC118940998 NA coding downstream 461036 54254893 ~ 54258383 (+)
G1561848 NA non-coding upstream 25188 53740184 ~ 53747303 (+)
G1561847 NA non-coding upstream 28264 53736039 ~ 53744227 (+)
G1561840 NA non-coding upstream 39041 53733054 ~ 53733450 (+)
G1561839 LOC105030512 non-coding upstream 39506 53732597 ~ 53732985 (+)
G1561838 NA non-coding upstream 40102 53732133 ~ 53732389 (+)
G1561853 NA non-coding downstream 61410 53855267 ~ 53868406 (+)
G1561843 mrpl3 non-coding downstream 93282 53887139 ~ 53894948 (+)
G1561864 NA non-coding downstream 118386 53912243 ~ 53912720 (+)
G1561891 NA non-coding downstream 121291 53915148 ~ 53915563 (+)
G1561544 LOC106588750 other upstream 484026 53277790 ~ 53288465 (+)
snrpd1 snrpd1 other upstream 593554 53175661 ~ 53178938 (+)
G1560957 NA other upstream 1330550 52441146 ~ 52441941 (+)
G1560911 NA other upstream 1416656 52355297 ~ 52355835 (+)
G1561845 NA other downstream 23307 53817164 ~ 53840871 (+)
G1561856 NA other downstream 78316 53872173 ~ 53876930 (+)
LOC110496545 LOC106588816 other downstream 715901 54412770 ~ 54510923 (+)
G1563547 NA other downstream 1344791 55138648 ~ 55139231 (+)
G1564470 NA other downstream 2114393 55908085 ~ 55908934 (+)

Expression


Co-expression Network