Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561857 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53791692 ~ 53792239 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1786927 | True | 448 | lncRNA | 0.46 | 2 | 53791692 | 53792239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514975 | LOC106588804 | coding | upstream | 61276 | 53713836 ~ 53730416 (+) |
| LOC110496530 | LOC106588804 | coding | upstream | 88382 | 53675493 ~ 53703310 (+) |
| klhl7 | klhl7 | coding | upstream | 128139 | 53656226 ~ 53663553 (+) |
| LOC110496949 | LOC106588787 | coding | upstream | 170302 | 53618822 ~ 53621390 (+) |
| itgb8 | LOC106588794 | coding | upstream | 276718 | 53497721 ~ 53514974 (+) |
| LOC110519664 | LOC106588805 | coding | downstream | 19844 | 53812083 ~ 53882492 (+) |
| dync1li1 | LOC106588808 | coding | downstream | 124053 | 53916292 ~ 53928304 (+) |
| LOC110496857 | LOC106588809 | coding | downstream | 191398 | 53983637 ~ 54008038 (+) |
| gmpr | gmpr | coding | downstream | 230043 | 54022282 ~ 54036714 (+) |
| LOC118940998 | NA | coding | downstream | 462654 | 54254893 ~ 54258383 (+) |
| G1561873 | NA | non-coding | upstream | 12626 | 53775205 ~ 53779066 (+) |
| G1561848 | NA | non-coding | upstream | 44389 | 53740184 ~ 53747303 (+) |
| G1561847 | NA | non-coding | upstream | 47465 | 53736039 ~ 53744227 (+) |
| G1561840 | NA | non-coding | upstream | 58242 | 53733054 ~ 53733450 (+) |
| G1561839 | LOC105030512 | non-coding | upstream | 58707 | 53732597 ~ 53732985 (+) |
| G1561853 | NA | non-coding | downstream | 63028 | 53855267 ~ 53868406 (+) |
| G1561843 | mrpl3 | non-coding | downstream | 94900 | 53887139 ~ 53894948 (+) |
| G1561864 | NA | non-coding | downstream | 120004 | 53912243 ~ 53912720 (+) |
| G1561891 | NA | non-coding | downstream | 122909 | 53915148 ~ 53915563 (+) |
| G1561544 | LOC106588750 | other | upstream | 503227 | 53277790 ~ 53288465 (+) |
| snrpd1 | snrpd1 | other | upstream | 612755 | 53175661 ~ 53178938 (+) |
| G1560957 | NA | other | upstream | 1349751 | 52441146 ~ 52441941 (+) |
| G1560911 | NA | other | upstream | 1435857 | 52355297 ~ 52355835 (+) |
| G1561845 | NA | other | downstream | 24925 | 53817164 ~ 53840871 (+) |
| G1561856 | NA | other | downstream | 79934 | 53872173 ~ 53876930 (+) |
| LOC110496545 | LOC106588816 | other | downstream | 717519 | 54412770 ~ 54510923 (+) |
| G1563547 | NA | other | downstream | 1346409 | 55138648 ~ 55139231 (+) |
| G1564470 | NA | other | downstream | 2116011 | 55908085 ~ 55908934 (+) |
