Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561853 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53855267 ~ 53868406 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1786923 | True | 236 | lncRNA | 0.44 | 2 | 53855267 | 53868406 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514975 | LOC106588804 | coding | upstream | 124851 | 53713836 ~ 53730416 (+) |
| LOC110496530 | LOC106588804 | coding | upstream | 151957 | 53675493 ~ 53703310 (+) |
| klhl7 | klhl7 | coding | upstream | 191714 | 53656226 ~ 53663553 (+) |
| LOC110496949 | LOC106588787 | coding | upstream | 233877 | 53618822 ~ 53621390 (+) |
| itgb8 | LOC106588794 | coding | upstream | 340293 | 53497721 ~ 53514974 (+) |
| dync1li1 | LOC106588808 | coding | downstream | 47886 | 53916292 ~ 53928304 (+) |
| LOC110496857 | LOC106588809 | coding | downstream | 115231 | 53983637 ~ 54008038 (+) |
| gmpr | gmpr | coding | downstream | 153876 | 54022282 ~ 54036714 (+) |
| LOC118940998 | NA | coding | downstream | 386487 | 54254893 ~ 54258383 (+) |
| LOC110496546 | LOC106588814 | coding | downstream | 454411 | 54322817 ~ 54409921 (+) |
| G1561851 | NA | non-coding | upstream | 51543 | 53769857 ~ 53803724 (+) |
| G1561849 | NA | non-coding | upstream | 58424 | 53789231 ~ 53796843 (+) |
| G1561855 | NA | non-coding | upstream | 61410 | 53772491 ~ 53793857 (+) |
| G1561857 | NA | non-coding | upstream | 63028 | 53791692 ~ 53792239 (+) |
| G1561873 | NA | non-coding | upstream | 76201 | 53775205 ~ 53779066 (+) |
| G1561843 | mrpl3 | non-coding | downstream | 18733 | 53887139 ~ 53894948 (+) |
| G1561864 | NA | non-coding | downstream | 43837 | 53912243 ~ 53912720 (+) |
| G1561891 | NA | non-coding | downstream | 46742 | 53915148 ~ 53915563 (+) |
| G1561943 | LOC106588811 | non-coding | downstream | 175666 | 54044072 ~ 54053417 (+) |
| G1561845 | NA | other | upstream | 14396 | 53817164 ~ 53840871 (+) |
| G1561544 | LOC106588750 | other | upstream | 566802 | 53277790 ~ 53288465 (+) |
| snrpd1 | snrpd1 | other | upstream | 676330 | 53175661 ~ 53178938 (+) |
| G1560957 | NA | other | upstream | 1413326 | 52441146 ~ 52441941 (+) |
| G1561856 | NA | other | downstream | 3767 | 53872173 ~ 53876930 (+) |
| LOC110496545 | LOC106588816 | other | downstream | 641352 | 54412770 ~ 54510923 (+) |
| G1563547 | NA | other | downstream | 1270242 | 55138648 ~ 55139231 (+) |
| G1564470 | NA | other | downstream | 2039844 | 55908085 ~ 55908934 (+) |
| LOC110496862 | LOC106588838 | other | downstream | 2160532 | 56028870 ~ 56504444 (+) |
