G1562828


Basic Information

Item Value
gene id G1562828
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 53874410 ~ 53875592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1788103
ggtgtgggacagagggatggagaagaggtgtgggacagagggatgggacagagggatggagaagaggtgtgggacagagggatggagaagaggtgtgggacagagggatgggacagagggatggagaagaggtgtgggacagaggtgtgggacagagggatgggacagaggtgtgggacagagggatgggacaGAGGTGTgcgacagagggatggagaagaggtgtgggacagagggatgggacagagggatggagaagaggtgtgggacagagggatgggacagagggatggacagaggtgtgggacagaggtgtgggacagagggatggagaagaggtgtgggacagaggtgtgggacagagggatggagaagaggtgtgggacagaggtgtgggacagagggatgggacagagggatggagaagaggtgtgggacagagggatgggacagagggatggagaagaggtgtgggacagagggatgggacagagggatggacagaggtgtgggacagagg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592894, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1788103 True 520 TUCP 0.60 3 53874410 53875592

Neighbor

gene id symbol gene type direction distance location
LOC118941188 NA coding downstream 127403 53744387 ~ 53747035 (-)
LOC110496535 NA coding downstream 133358 53738342 ~ 53741052 (-)
LOC110496534 NA coding downstream 168777 53703762 ~ 53705633 (-)
aste1b aste1 coding downstream 203908 53663547 ~ 53670502 (-)
si:ch73-345f18.3 LOC106588788 coding downstream 218934 53652973 ~ 53655476 (-)
mrpl3 mrpl3 coding upstream 11545 53887137 ~ 53895002 (-)
cpne4b cpne4 coding upstream 26656 53902248 ~ 53915395 (-)
atxn1a LOC106588811 coding upstream 173272 54048864 ~ 54244155 (-)
LOC110496543 LOC106588812 coding upstream 404952 54280544 ~ 54286577 (-)
LOC110496544 LOC106588813 coding upstream 438632 54314224 ~ 54315645 (-)
G1562829 NA non-coding downstream 3760 53842606 ~ 53870650 (-)
G1562826 NA non-coding downstream 8013 53822929 ~ 53866397 (-)
G1562837 NA non-coding downstream 30326 53835467 ~ 53844084 (-)
G1562827 NA non-coding downstream 31493 53831952 ~ 53842917 (-)
G1562823 NA non-coding downstream 51668 53817046 ~ 53822742 (-)
G1562852 NA non-coding upstream 5269 53880861 ~ 53881183 (-)
G1562853 NA non-coding upstream 5774 53881366 ~ 53883069 (-)
G1562854 NA non-coding upstream 7485 53883077 ~ 53884156 (-)
G1562857 NA non-coding upstream 20382 53895974 ~ 53896404 (-)
G1562856 NA non-coding upstream 21188 53896780 ~ 53898361 (-)
G1562816 LOC100136012 other downstream 121727 53752406 ~ 53752683 (-)
tomm7 NA other downstream 245988 53621900 ~ 53628443 (-)
G1562762 NA other downstream 271716 53598650 ~ 53602694 (-)
G1561279 NA other downstream 1226633 52644989 ~ 52647777 (-)
LOC110496491 LOC106588724 other downstream 1517100 52352725 ~ 52396978 (-)
LOC110496860 LOC106588819 other upstream 763275 54636849 ~ 54652932 (-)
G1563253 NA other upstream 785034 54660626 ~ 54665643 (-)
G1565122 LOC106613431 other upstream 2605876 56481468 ~ 56488289 (-)
LOC110496560 LOC106588840 other upstream 2852760 56728341 ~ 56737381 (-)

Expression


Co-expression Network