Gene
RNA
| Item | Value |
|---|---|
| gene id | G1562852 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53880861 ~ 53881183 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| reverse transcriptase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1788128 | True | 323 | lncRNA | 0.33 | 1 | 53880861 | 53881183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941188 | NA | coding | downstream | 133854 | 53744387 ~ 53747035 (-) |
| LOC110496535 | NA | coding | downstream | 139809 | 53738342 ~ 53741052 (-) |
| LOC110496534 | NA | coding | downstream | 175228 | 53703762 ~ 53705633 (-) |
| aste1b | aste1 | coding | downstream | 210359 | 53663547 ~ 53670502 (-) |
| si:ch73-345f18.3 | LOC106588788 | coding | downstream | 225385 | 53652973 ~ 53655476 (-) |
| mrpl3 | mrpl3 | coding | upstream | 5954 | 53887137 ~ 53895002 (-) |
| cpne4b | cpne4 | coding | upstream | 21065 | 53902248 ~ 53915395 (-) |
| atxn1a | LOC106588811 | coding | upstream | 167681 | 54048864 ~ 54244155 (-) |
| LOC110496543 | LOC106588812 | coding | upstream | 399361 | 54280544 ~ 54286577 (-) |
| LOC110496544 | LOC106588813 | coding | upstream | 433041 | 54314224 ~ 54315645 (-) |
| G1562829 | NA | non-coding | downstream | 10211 | 53842606 ~ 53870650 (-) |
| G1562826 | NA | non-coding | downstream | 14464 | 53822929 ~ 53866397 (-) |
| G1562837 | NA | non-coding | downstream | 36777 | 53835467 ~ 53844084 (-) |
| G1562827 | NA | non-coding | downstream | 37944 | 53831952 ~ 53842917 (-) |
| G1562823 | NA | non-coding | downstream | 58119 | 53817046 ~ 53822742 (-) |
| G1562853 | NA | non-coding | upstream | 183 | 53881366 ~ 53883069 (-) |
| G1562854 | NA | non-coding | upstream | 1894 | 53883077 ~ 53884156 (-) |
| G1562857 | NA | non-coding | upstream | 14791 | 53895974 ~ 53896404 (-) |
| G1562856 | NA | non-coding | upstream | 15597 | 53896780 ~ 53898361 (-) |
| G1562859 | NA | non-coding | upstream | 24079 | 53905262 ~ 53905562 (-) |
| G1562828 | NA | other | downstream | 5269 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 128178 | 53752406 ~ 53752683 (-) |
| tomm7 | NA | other | downstream | 252439 | 53621900 ~ 53628443 (-) |
| G1562762 | NA | other | downstream | 278167 | 53598650 ~ 53602694 (-) |
| G1561279 | NA | other | downstream | 1233084 | 52644989 ~ 52647777 (-) |
| LOC110496860 | LOC106588819 | other | upstream | 757684 | 54636849 ~ 54652932 (-) |
| G1563253 | NA | other | upstream | 779443 | 54660626 ~ 54665643 (-) |
| G1565122 | LOC106613431 | other | upstream | 2600285 | 56481468 ~ 56488289 (-) |
| LOC110496560 | LOC106588840 | other | upstream | 2847169 | 56728341 ~ 56737381 (-) |
