Gene
RNA
| Item | Value |
|---|---|
| gene id | G1561843 |
| gene name | mrpl3 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53887139 ~ 53894948 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mrpl3 | Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 9. Orthologous to human MRPL3 (mitochondrial ribosomal protein L3). |
| description |
|---|
| 39S ribosomal protein L3, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1786908 | True | 1307 | lncRNA | 0.49 | 11 | 53887139 | 53894948 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519664 | LOC106588805 | coding | upstream | 4647 | 53812083 ~ 53882492 (+) |
| LOC110514975 | LOC106588804 | coding | upstream | 156723 | 53713836 ~ 53730416 (+) |
| LOC110496530 | LOC106588804 | coding | upstream | 183829 | 53675493 ~ 53703310 (+) |
| klhl7 | klhl7 | coding | upstream | 223586 | 53656226 ~ 53663553 (+) |
| LOC110496949 | LOC106588787 | coding | upstream | 265749 | 53618822 ~ 53621390 (+) |
| dync1li1 | LOC106588808 | coding | downstream | 21344 | 53916292 ~ 53928304 (+) |
| LOC110496857 | LOC106588809 | coding | downstream | 88689 | 53983637 ~ 54008038 (+) |
| gmpr | gmpr | coding | downstream | 127334 | 54022282 ~ 54036714 (+) |
| LOC118940998 | NA | coding | downstream | 359945 | 54254893 ~ 54258383 (+) |
| LOC110496546 | LOC106588814 | coding | downstream | 427869 | 54322817 ~ 54409921 (+) |
| G1561853 | NA | non-coding | upstream | 18733 | 53855267 ~ 53868406 (+) |
| G1561851 | NA | non-coding | upstream | 83415 | 53769857 ~ 53803724 (+) |
| G1561849 | NA | non-coding | upstream | 90296 | 53789231 ~ 53796843 (+) |
| G1561855 | NA | non-coding | upstream | 93282 | 53772491 ~ 53793857 (+) |
| G1561857 | NA | non-coding | upstream | 94900 | 53791692 ~ 53792239 (+) |
| G1561864 | NA | non-coding | downstream | 17295 | 53912243 ~ 53912720 (+) |
| G1561891 | NA | non-coding | downstream | 20200 | 53915148 ~ 53915563 (+) |
| G1561943 | LOC106588811 | non-coding | downstream | 149124 | 54044072 ~ 54053417 (+) |
| G1561956 | NA | non-coding | downstream | 189920 | 54084868 ~ 54097923 (+) |
| G1561856 | NA | other | upstream | 10209 | 53872173 ~ 53876930 (+) |
| G1561845 | NA | other | upstream | 46268 | 53817164 ~ 53840871 (+) |
| G1561544 | LOC106588750 | other | upstream | 598674 | 53277790 ~ 53288465 (+) |
| snrpd1 | snrpd1 | other | upstream | 708202 | 53175661 ~ 53178938 (+) |
| LOC110496545 | LOC106588816 | other | downstream | 614810 | 54412770 ~ 54510923 (+) |
| G1563547 | NA | other | downstream | 1243700 | 55138648 ~ 55139231 (+) |
| G1564470 | NA | other | downstream | 2013302 | 55908085 ~ 55908934 (+) |
| LOC110496862 | LOC106588838 | other | downstream | 2133990 | 56028870 ~ 56504444 (+) |
| G1564638 | LOC106607612 | other | downstream | 2155640 | 56050588 ~ 56051793 (+) |
