Gene
RNA
| Item | Value |
|---|---|
| gene id | G1562857 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53895974 ~ 53896404 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1788138 | True | 431 | lncRNA | 0.45 | 1 | 53895974 | 53896404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrpl3 | mrpl3 | coding | downstream | 972 | 53887137 ~ 53895002 (-) |
| LOC118941188 | NA | coding | downstream | 148967 | 53744387 ~ 53747035 (-) |
| LOC110496535 | NA | coding | downstream | 154922 | 53738342 ~ 53741052 (-) |
| LOC110496534 | NA | coding | downstream | 190341 | 53703762 ~ 53705633 (-) |
| aste1b | aste1 | coding | downstream | 225472 | 53663547 ~ 53670502 (-) |
| cpne4b | cpne4 | coding | upstream | 5844 | 53902248 ~ 53915395 (-) |
| atxn1a | LOC106588811 | coding | upstream | 152460 | 54048864 ~ 54244155 (-) |
| LOC110496543 | LOC106588812 | coding | upstream | 384140 | 54280544 ~ 54286577 (-) |
| LOC110496544 | LOC106588813 | coding | upstream | 417820 | 54314224 ~ 54315645 (-) |
| LOC118941189 | mrpl53 | coding | upstream | 419720 | 54316124 ~ 54317624 (-) |
| G1562854 | NA | non-coding | downstream | 11818 | 53883077 ~ 53884156 (-) |
| G1562853 | NA | non-coding | downstream | 12905 | 53881366 ~ 53883069 (-) |
| G1562852 | NA | non-coding | downstream | 14791 | 53880861 ~ 53881183 (-) |
| G1562829 | NA | non-coding | downstream | 25324 | 53842606 ~ 53870650 (-) |
| G1562837 | NA | non-coding | downstream | 51890 | 53835467 ~ 53844084 (-) |
| G1562856 | NA | non-coding | upstream | 376 | 53896780 ~ 53898361 (-) |
| G1562859 | NA | non-coding | upstream | 8858 | 53905262 ~ 53905562 (-) |
| G1562860 | NA | non-coding | upstream | 11663 | 53908067 ~ 53908275 (-) |
| G1562868 | LOC106588808 | non-coding | upstream | 28256 | 53924660 ~ 53925478 (-) |
| G1562866 | NA | non-coding | upstream | 31317 | 53927721 ~ 53928165 (-) |
| G1562828 | NA | other | downstream | 20382 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 143291 | 53752406 ~ 53752683 (-) |
| tomm7 | NA | other | downstream | 267552 | 53621900 ~ 53628443 (-) |
| G1562762 | NA | other | downstream | 293280 | 53598650 ~ 53602694 (-) |
| LOC110496860 | LOC106588819 | other | upstream | 742463 | 54636849 ~ 54652932 (-) |
| G1563253 | NA | other | upstream | 764222 | 54660626 ~ 54665643 (-) |
| G1565122 | LOC106613431 | other | upstream | 2585064 | 56481468 ~ 56488289 (-) |
| LOC110496560 | LOC106588840 | other | upstream | 2831948 | 56728341 ~ 56737381 (-) |
| G1566899 | NA | other | upstream | 4131107 | 58027511 ~ 58027790 (-) |
