Gene
RNA
| Item | Value |
|---|---|
| gene id | G1562866 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 53927721 ~ 53928165 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1788149 | True | 445 | lncRNA | 0.41 | 1 | 53927721 | 53928165 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cpne4b | cpne4 | coding | downstream | 12326 | 53902248 ~ 53915395 (-) |
| mrpl3 | mrpl3 | coding | downstream | 32719 | 53887137 ~ 53895002 (-) |
| LOC118941188 | NA | coding | downstream | 180714 | 53744387 ~ 53747035 (-) |
| LOC110496535 | NA | coding | downstream | 186669 | 53738342 ~ 53741052 (-) |
| LOC110496534 | NA | coding | downstream | 222088 | 53703762 ~ 53705633 (-) |
| atxn1a | LOC106588811 | coding | upstream | 120699 | 54048864 ~ 54244155 (-) |
| LOC110496543 | LOC106588812 | coding | upstream | 352379 | 54280544 ~ 54286577 (-) |
| LOC110496544 | LOC106588813 | coding | upstream | 386059 | 54314224 ~ 54315645 (-) |
| LOC118941189 | mrpl53 | coding | upstream | 387959 | 54316124 ~ 54317624 (-) |
| tpd52 | tpd52 | coding | upstream | 597528 | 54525693 ~ 54552317 (-) |
| G1562868 | LOC106588808 | non-coding | downstream | 2243 | 53924660 ~ 53925478 (-) |
| G1562860 | NA | non-coding | downstream | 19446 | 53908067 ~ 53908275 (-) |
| G1562859 | NA | non-coding | downstream | 22159 | 53905262 ~ 53905562 (-) |
| G1562856 | NA | non-coding | downstream | 29360 | 53896780 ~ 53898361 (-) |
| G1562857 | NA | non-coding | downstream | 31317 | 53895974 ~ 53896404 (-) |
| G1562930 | LOC106588809 | non-coding | upstream | 77921 | 54006086 ~ 54008006 (-) |
| G1562891 | NA | non-coding | upstream | 115933 | 54044098 ~ 54047835 (-) |
| G1562978 | NA | non-coding | upstream | 195297 | 54123462 ~ 54123782 (-) |
| G1563015 | NA | non-coding | upstream | 287262 | 54215427 ~ 54215762 (-) |
| G1562828 | NA | other | downstream | 52129 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 175038 | 53752406 ~ 53752683 (-) |
| tomm7 | NA | other | downstream | 299299 | 53621900 ~ 53628443 (-) |
| G1562762 | NA | other | downstream | 325027 | 53598650 ~ 53602694 (-) |
| LOC110496860 | LOC106588819 | other | upstream | 710702 | 54636849 ~ 54652932 (-) |
| G1563253 | NA | other | upstream | 732461 | 54660626 ~ 54665643 (-) |
| G1565122 | LOC106613431 | other | upstream | 2553303 | 56481468 ~ 56488289 (-) |
| LOC110496560 | LOC106588840 | other | upstream | 2800187 | 56728341 ~ 56737381 (-) |
| G1566899 | NA | other | upstream | 4099346 | 58027511 ~ 58027790 (-) |
