G1563015



Basic Information


Item Value
gene id G1563015
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 54215427 ~ 54215762 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1788324
AcctgatttacgcagtctcctctgaacagttgatattgagatgtgtctgttacctgaactcagtgaagcatttttttgggctgcaatttctgaggctggtaactctaatgagcttatcctctgcagcagaggtaactctgggtcttccattcctgtgacgaacatcatgagagccagtttcatcatagcgcttgatggtttttgtgactgcacttgaagatactttcaaagttcttggctgaccttcatgtcttaaagcagggctggccttcatgtcttaaagcaacCCTCT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1788324 True 292 lncRNA 0.44 2 54215427 54215762

Neighbor


gene id symbol gene type direction distance location
cpne4b cpne4 coding downstream 300032 53902248 ~ 53915395 (-)
mrpl3 mrpl3 coding downstream 320425 53887137 ~ 53895002 (-)
LOC118941188 NA coding downstream 468420 53744387 ~ 53747035 (-)
LOC110496535 NA coding downstream 474375 53738342 ~ 53741052 (-)
LOC110496534 NA coding downstream 509794 53703762 ~ 53705633 (-)
LOC110496543 LOC106588812 coding upstream 64782 54280544 ~ 54286577 (-)
LOC110496544 LOC106588813 coding upstream 98462 54314224 ~ 54315645 (-)
LOC118941189 mrpl53 coding upstream 100362 54316124 ~ 54317624 (-)
tpd52 tpd52 coding upstream 309931 54525693 ~ 54552317 (-)
LOC110496860 LOC106588819 coding upstream 421087 54636849 ~ 54652932 (-)
G1562978 NA non-coding downstream 91645 54123462 ~ 54123782 (-)
G1562891 NA non-coding downstream 167592 54044098 ~ 54047835 (-)
G1562930 LOC106588809 non-coding downstream 207421 54006086 ~ 54008006 (-)
G1562866 NA non-coding downstream 287262 53927721 ~ 53928165 (-)
G1562868 LOC106588808 non-coding downstream 289949 53924660 ~ 53925478 (-)
G1563002 NA non-coding upstream 19286 54235048 ~ 54235442 (-)
G1563100 NA non-coding upstream 153359 54369121 ~ 54371307 (-)
G1563217 NA non-coding upstream 341782 54557544 ~ 54567610 (-)
G1563234 NA non-coding upstream 390993 54606755 ~ 54609700 (-)
G1562828 NA other downstream 339835 53874410 ~ 53875592 (-)
G1562816 LOC100136012 other downstream 462744 53752406 ~ 53752683 (-)
tomm7 NA other downstream 587005 53621900 ~ 53628443 (-)
G1562762 NA other downstream 612733 53598650 ~ 53602694 (-)
G1563253 NA other upstream 444864 54660626 ~ 54665643 (-)
G1565122 LOC106613431 other upstream 2265706 56481468 ~ 56488289 (-)
LOC110496560 LOC106588840 other upstream 2512590 56728341 ~ 56737381 (-)
G1566899 NA other upstream 3811749 58027511 ~ 58027790 (-)

Expression



Co-expression Network