Gene
RNA
| Item | Value |
|---|---|
| gene id | G1562121 |
| gene name | LOC106588813 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54314229 ~ 54315340 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| fatty acid-binding protein, heart-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1787233 | True | 1025 | lncRNA | 0.39 | 2 | 54314229 | 54315340 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940998 | NA | coding | upstream | 55846 | 54254893 ~ 54258383 (+) |
| gmpr | gmpr | coding | upstream | 277515 | 54022282 ~ 54036714 (+) |
| LOC110496857 | LOC106588809 | coding | upstream | 306191 | 53983637 ~ 54008038 (+) |
| dync1li1 | LOC106588808 | coding | upstream | 386048 | 53916292 ~ 53928304 (+) |
| LOC110519664 | LOC106588805 | coding | upstream | 431737 | 53812083 ~ 53882492 (+) |
| LOC110496546 | LOC106588814 | coding | downstream | 7477 | 54322817 ~ 54409921 (+) |
| LOC110496545 | LOC106588816 | coding | downstream | 97430 | 54412770 ~ 54510923 (+) |
| LOC110496548 | LOC106588817 | coding | downstream | 239038 | 54554378 ~ 54576444 (+) |
| LOC110496549 | LOC106588818 | coding | downstream | 316045 | 54631385 ~ 54635257 (+) |
| LOC110496550 | LOC106588820 | coding | downstream | 342066 | 54657406 ~ 54687881 (+) |
| G1562086 | NA | non-coding | upstream | 53132 | 54260873 ~ 54261097 (+) |
| G1562066 | NA | non-coding | upstream | 90349 | 54222678 ~ 54223880 (+) |
| G1562039 | NA | non-coding | upstream | 127372 | 54185916 ~ 54186857 (+) |
| G1561990 | NA | non-coding | upstream | 148942 | 54122351 ~ 54165287 (+) |
| G1561989 | NA | non-coding | upstream | 169631 | 54121731 ~ 54144598 (+) |
| G1562140 | NA | non-coding | downstream | 23897 | 54339237 ~ 54339805 (+) |
| G1562195 | NA | non-coding | downstream | 210704 | 54526044 ~ 54528153 (+) |
| G1562197 | NA | non-coding | downstream | 214288 | 54529628 ~ 54552380 (+) |
| G1562239 | NA | non-coding | downstream | 218054 | 54533394 ~ 54534406 (+) |
| G1562259 | NA | non-coding | downstream | 282057 | 54597397 ~ 54716118 (+) |
| G1561856 | NA | other | upstream | 437299 | 53872173 ~ 53876930 (+) |
| G1561845 | NA | other | upstream | 473358 | 53817164 ~ 53840871 (+) |
| LOC110514975 | LOC106588804 | other | upstream | 589565 | 53713836 ~ 53730416 (+) |
| G1561544 | LOC106588750 | other | upstream | 1025764 | 53277790 ~ 53288465 (+) |
| snrpd1 | snrpd1 | other | upstream | 1135292 | 53175661 ~ 53178938 (+) |
| G1563547 | NA | other | downstream | 823308 | 55138648 ~ 55139231 (+) |
| G1564470 | NA | other | downstream | 1592910 | 55908085 ~ 55908934 (+) |
| LOC110496862 | LOC106588838 | other | downstream | 1713598 | 56028870 ~ 56504444 (+) |
| G1564638 | LOC106607612 | other | downstream | 1735248 | 56050588 ~ 56051793 (+) |
