Gene
RNA
| Item | Value |
|---|---|
| gene id | G1563100 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54369121 ~ 54371307 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1788411 | True | 255 | lncRNA | 0.55 | 2 | 54369121 | 54371307 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941189 | mrpl53 | coding | downstream | 51497 | 54316124 ~ 54317624 (-) |
| LOC110496544 | LOC106588813 | coding | downstream | 53476 | 54314224 ~ 54315645 (-) |
| LOC110496543 | LOC106588812 | coding | downstream | 82544 | 54280544 ~ 54286577 (-) |
| atxn1a | LOC106588811 | coding | downstream | 124966 | 54048864 ~ 54244155 (-) |
| cpne4b | cpne4 | coding | downstream | 453726 | 53902248 ~ 53915395 (-) |
| tpd52 | tpd52 | coding | upstream | 154386 | 54525693 ~ 54552317 (-) |
| LOC110496860 | LOC106588819 | coding | upstream | 265542 | 54636849 ~ 54652932 (-) |
| LOC110496552 | gmnn | coding | upstream | 456410 | 54827717 ~ 54839922 (-) |
| LOC118941190 | LOC106588825 | coding | upstream | 471127 | 54842434 ~ 54853844 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 2333545 | 56704852 ~ 56726308 (-) |
| G1563002 | NA | non-coding | downstream | 133679 | 54235048 ~ 54235442 (-) |
| G1563015 | NA | non-coding | downstream | 153359 | 54215427 ~ 54215762 (-) |
| G1562978 | NA | non-coding | downstream | 245339 | 54123462 ~ 54123782 (-) |
| G1563217 | NA | non-coding | upstream | 186237 | 54557544 ~ 54567610 (-) |
| G1563234 | NA | non-coding | upstream | 235448 | 54606755 ~ 54609700 (-) |
| G1563255 | NA | non-coding | upstream | 294422 | 54665729 ~ 54666665 (-) |
| G1563266 | NA | non-coding | upstream | 312706 | 54684013 ~ 54687483 (-) |
| G1563284 | NA | non-coding | upstream | 348908 | 54720215 ~ 54720509 (-) |
| mrpl3 | mrpl3 | other | downstream | 474172 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 493529 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 616438 | 53752406 ~ 53752683 (-) |
| tomm7 | NA | other | downstream | 740699 | 53621900 ~ 53628443 (-) |
| G1562762 | NA | other | downstream | 766427 | 53598650 ~ 53602694 (-) |
| G1563253 | NA | other | upstream | 289319 | 54660626 ~ 54665643 (-) |
| G1565122 | LOC106613431 | other | upstream | 2110161 | 56481468 ~ 56488289 (-) |
| LOC110496560 | LOC106588840 | other | upstream | 2357045 | 56728341 ~ 56737381 (-) |
| G1566899 | NA | other | upstream | 3656204 | 58027511 ~ 58027790 (-) |
