G1563234


Basic Information

Item Value
gene id G1563234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 54606755 ~ 54609700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1788572
gtaaaatactactcgagtaaaagtctaaaagtatttggttttaaatgaacatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacaacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaagaagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1788572 True 658 lncRNA 0.39 2 54606755 54609700

Neighbor

gene id symbol gene type direction distance location
tpd52 tpd52 coding downstream 54438 54525693 ~ 54552317 (-)
LOC118941189 mrpl53 coding downstream 289131 54316124 ~ 54317624 (-)
LOC110496544 LOC106588813 coding downstream 291110 54314224 ~ 54315645 (-)
LOC110496543 LOC106588812 coding downstream 320178 54280544 ~ 54286577 (-)
atxn1a LOC106588811 coding downstream 362600 54048864 ~ 54244155 (-)
LOC110496860 LOC106588819 coding upstream 27149 54636849 ~ 54652932 (-)
LOC110496552 gmnn coding upstream 218017 54827717 ~ 54839922 (-)
LOC118941190 LOC106588825 coding upstream 232734 54842434 ~ 54853844 (-)
LOC110496559 LOC106570512 coding upstream 2095152 56704852 ~ 56726308 (-)
LOC110496560 LOC106588840 coding upstream 2118641 56728341 ~ 56737381 (-)
G1563217 NA non-coding downstream 39145 54557544 ~ 54567610 (-)
G1563100 NA non-coding downstream 235448 54369121 ~ 54371307 (-)
G1563002 NA non-coding downstream 371313 54235048 ~ 54235442 (-)
G1563015 NA non-coding downstream 390993 54215427 ~ 54215762 (-)
G1563255 NA non-coding upstream 56029 54665729 ~ 54666665 (-)
G1563266 NA non-coding upstream 74313 54684013 ~ 54687483 (-)
G1563284 NA non-coding upstream 110515 54720215 ~ 54720509 (-)
G1563272 NA non-coding upstream 205161 54814861 ~ 54817329 (-)
G1563328 NA non-coding upstream 263086 54872786 ~ 54873168 (-)
mrpl3 mrpl3 other downstream 711806 53887137 ~ 53895002 (-)
G1562828 NA other downstream 731163 53874410 ~ 53875592 (-)
G1562816 LOC100136012 other downstream 854072 53752406 ~ 53752683 (-)
tomm7 NA other downstream 978333 53621900 ~ 53628443 (-)
G1562762 NA other downstream 1004061 53598650 ~ 53602694 (-)
G1563253 NA other upstream 50926 54660626 ~ 54665643 (-)
G1565122 LOC106613431 other upstream 1871768 56481468 ~ 56488289 (-)
G1566899 NA other upstream 3417811 58027511 ~ 58027790 (-)

Expression


Co-expression Network