G1563253


Basic Information

Item Value
gene id G1563253
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 54660626 ~ 54665643 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1788592
aaaaataaagggAAACTTAAACACCACAacgtaactccaagtcaatcacacttctgtgaactcaaactgtccacttaggaagcaacactgattgacaatacatttcacatgctgttgtgcaaatggaatagacaacaggtggaaataggcaattagcaagacacccccaataaaggagtggttctgcaggtggtgaccacagaccacttctcagttcctatgcttcctggctgatgttttggtcacttttgaatgctggcggtgctttcactctagtggtagcatgagacggagtctacaacccacacaagtggctcaggtagtgcagctcatccaggatggcacatcaatgcgagctgtggcaagaaggtttgctgtgtctgtcagcgtagtgtccagagcatggaggcgctaccaggagacaggccagtacatcaggagatgtggaggaggccgtaggagggcaacaacccagcagcaggaccgctacctccgcctttgtgcaaggaggagcaggaggagcactgccagagccctgcaaaatgtcctccagcaggccacaaatgtgcatgtgtctgctcaaacggtcagaaacagactccatgagggtggtatgagggcccgacgtccacaggtgggggttgtgcttacagcccaacaccgtgcaggacatttggcaccagagaacaccaagattggcaaattctgtgctcttcacagatgaaagcaggttcacactgagcacgtgacagacgtcacaagagtctggagacgccgtggagaacgttctgctgcctccaacatcctccagcatgaccggtttggcggtgggtcagtatttctttggggggccacacagccctccatgtgctcgccagaggtagcctgactgccattaggtactgagatgagatcctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcctaatgcaagacaatgctagacctcatgtggctggagtgtgtcagcagttcctgcaagaggaaggcattgatgctatggactggcccgcccgttccccagacctgattccaattgagcacatctgggacatcatgtctcgctccatccaccaacgccacgttgcaccacagactgtccaggagttggcggatgctttagtccaggtctgggaggagatccctcaggagaccatccacaacctcatcaggagcatgcccgggcgttgtagggaggtcatacaggcacgtggaggccacacacactactgagcctcattttgacttgttttaaggacattaggACACTTGTTTTAGGacacttgttttaaggacatcaaagttggatcagcctgtagtgtggttttccactttaattttgagtgtgactcaaAACTATTGATaatgtttgtgtgattttgttgtcagcacattcaactatgtaaagaaaaaaagtatttaataagaatatttcattcattcagagctagtgtgtgttattttagtgctcctttatttttttgagcagcatatacatacatacatacatacatacatacatacatacatacatacatacatacatacataggcTATGGTCGTTCTCATACAAACCCTCACAATGACTAGCTAACGTGTACTTTACCCATTTTATTACATCTTTATATGttgcaaataaaatgtaaaaacaatcacataatatttaatattaatttcaaacaacggcattagcatgagagcaacttaccagtccaaaacaatgtcctctccgttcaaaaaaaaATATGCTTCAGTTTCAGAATCAAAGCTATGGGAGCTAATGAGTCTTCAAAAAGCAGATCTGTCTCACTTTCACGATCAATTTCCTCAAATTGTTTCTACATTCGTATATCTAGTCTTAGAAATAGCTTTCCTTGACTTATTCGCCATGATGTTGAAtaaataaacagctgaagatgcaaGTCACCGAAATACTGCTGTGCGTAATAAGCGTCGCTCCTTCACGATTGAATTGGCAATGGTGAAAGAACGGTCCTTACGCCAGCGTTCAATGGAAAGGTTTGTCTTACAACAAAGAACCATGGGATATTGCAGTTTACCtctgctcattggctatctacccagctagagttcaagacgatcagtggtcattgggttaaaatacagtcaatcaacgagacAGTGGTCATATAATTGGTGCACAATGGGCTTGTCTTCCAATTGGTTTTTCCGGGTCAATACGTCCCGCAAAATGACCCATcaagtttggttgtgttacaaacaaacagtTGATTGCaaggaaaccaaacatgactggataaAGTCAGGGAAAGTCTGTCTATTTTACGTTGAAAATTGAATGACACAAAATTCAACAAGATAagcgttcacaaaatgtttcgtgttaggctataaaaaatgGATTTAACTGAAccaaagaccattcattgtgtaacaatgagccttgggattgcaaccagagcaagatcttcaaaggtaaacaatttatttcaatgcaatctgtgattttgttacgcAAGTGCTGGTTGAATAAGTAGTTTGATATGGGggtctatgctcagataatcgaaGCGTATTCTTTCGCAATAaatctttttttaaatatgacaacgcagttggattaacaagattctaggcttttgaagcatgtgagacacttgtattttaagGAATGCTTAATATGACTATTTGTGGCGaacaccgtatgttgtcgaattcaAACCCgcatccgggatgggtagttcagAGAGGTTATTaattaaaagacaaaaaaaaattaaattaaacaatACTACATTACTTCCTATTAGCAATACATTTATTGTTTGAGAAACATGAGCATGCTCATCGGTTTCTGTTTCGTTGGTGTAATTTTAGCAGGAAACTAATATTTTGGCTGGTAAATTTTCCATCTAACTGCCAGTGGCTGTTGGACCAAAAATACAATTTTAGGCCCTGGTTATGACATGAATTtgtccgggatgctgGACTGGAGACCAGGGTAGAAGGATGGAGACGGGTGGAAGCAGCACGTCACTAAACAAGGCCACTGTCAGAGGCTCTCAGCTGATGGTCATCAATGTTCTTGATCAGCTGTACTCTTGACAAGA

Function

NR:

description
olfactory receptor family C subfamily 2 member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1788592 True 3134 TUCP 0.44 2 54660626 54665643

Neighbor

gene id symbol gene type direction distance location
LOC110496860 LOC106588819 coding downstream 7694 54636849 ~ 54652932 (-)
tpd52 tpd52 coding downstream 108309 54525693 ~ 54552317 (-)
LOC118941189 mrpl53 coding downstream 343002 54316124 ~ 54317624 (-)
LOC110496544 LOC106588813 coding downstream 344981 54314224 ~ 54315645 (-)
LOC110496543 LOC106588812 coding downstream 374049 54280544 ~ 54286577 (-)
LOC110496552 gmnn coding upstream 162074 54827717 ~ 54839922 (-)
LOC118941190 LOC106588825 coding upstream 176791 54842434 ~ 54853844 (-)
LOC110496559 LOC106570512 coding upstream 2039209 56704852 ~ 56726308 (-)
LOC110496560 LOC106588840 coding upstream 2062698 56728341 ~ 56737381 (-)
LOC110496863 NA coding upstream 2392894 57058537 ~ 57061029 (-)
G1563234 NA non-coding downstream 50926 54606755 ~ 54609700 (-)
G1563217 NA non-coding downstream 93016 54557544 ~ 54567610 (-)
G1563100 NA non-coding downstream 289319 54369121 ~ 54371307 (-)
G1563002 NA non-coding downstream 425184 54235048 ~ 54235442 (-)
G1563255 NA non-coding upstream 86 54665729 ~ 54666665 (-)
G1563266 NA non-coding upstream 18370 54684013 ~ 54687483 (-)
G1563284 NA non-coding upstream 54572 54720215 ~ 54720509 (-)
G1563272 NA non-coding upstream 149218 54814861 ~ 54817329 (-)
G1563328 NA non-coding upstream 207143 54872786 ~ 54873168 (-)
mrpl3 mrpl3 other downstream 765677 53887137 ~ 53895002 (-)
G1562828 NA other downstream 785034 53874410 ~ 53875592 (-)
G1562816 LOC100136012 other downstream 907943 53752406 ~ 53752683 (-)
tomm7 NA other downstream 1032204 53621900 ~ 53628443 (-)
G1565122 LOC106613431 other upstream 1815825 56481468 ~ 56488289 (-)
G1566899 NA other upstream 3361868 58027511 ~ 58027790 (-)
G1566923 NA other upstream 3409980 58074209 ~ 58078146 (-)
G1566972 NA other upstream 3501741 58167384 ~ 58167697 (-)

Expression


Co-expression Network