G1563255


Basic Information

Item Value
gene id G1563255
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 54665729 ~ 54666665 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1788596
ataaaacatacattcagataggatgatggggacaatttcagtgaaaaatataagagggcaacagtacttgtgcaaagtttcagaatgataacttccaaaacgtgtgctacatgacatttatcatgaagtcacccaggtgtcccacacaagtataactttatacaaaataccaaaatggtatttatatctatttatatagccccagcgaaaaactccctagaaaggcaaaaacctaggaagaaacctagagagggaccaggctgaggggtggccagtcctcttctggctgtgccgggtggagatcacagtggttgtagagggtgcaacaggacagcacctcagagtaaaaatgaacagtttagggttccatagccacaggtagaacagttgaaactggaacagcagcaagaccgggtggactggggacagcaaggagtcatcatggcaggtagtcctgaagcatggtccaagggctcaggtcctccgagagaaagagcagacttaaattcacacaagacaccggataagacaggaaaagtactccagataacatactgaccctagcccccacccactttgccatatAACCCCACCAACTTTGCCAAAACTCTAGACAATATTCTGCTGCTGATGCCAGaccagtctctttctgatgtaaagcagagggcCACTGAGCATGTGATGGGAGACTTCATCTTGCAAACACAGCAACGCCTCCATGCTGTTCCCTTTTGGCCcttaggcacatccatgcctgcacaaatatatttgggcagatgaacacttgtggcaggagcagaagggacagggcttggtgcagtggtgctgtagccagcaagctccttgatgCTCCCTCTAATGTAGACTGATTGGAGGAAGCATGCTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1788596 True 888 lncRNA 0.47 2 54665729 54666665

Neighbor

gene id symbol gene type direction distance location
LOC110496860 LOC106588819 coding downstream 12797 54636849 ~ 54652932 (-)
tpd52 tpd52 coding downstream 113412 54525693 ~ 54552317 (-)
LOC118941189 mrpl53 coding downstream 348105 54316124 ~ 54317624 (-)
LOC110496544 LOC106588813 coding downstream 350084 54314224 ~ 54315645 (-)
LOC110496543 LOC106588812 coding downstream 379152 54280544 ~ 54286577 (-)
LOC110496552 gmnn coding upstream 161052 54827717 ~ 54839922 (-)
LOC118941190 LOC106588825 coding upstream 175769 54842434 ~ 54853844 (-)
LOC110496559 LOC106570512 coding upstream 2038187 56704852 ~ 56726308 (-)
LOC110496560 LOC106588840 coding upstream 2061676 56728341 ~ 56737381 (-)
LOC110496863 NA coding upstream 2391872 57058537 ~ 57061029 (-)
G1563234 NA non-coding downstream 56029 54606755 ~ 54609700 (-)
G1563217 NA non-coding downstream 98119 54557544 ~ 54567610 (-)
G1563100 NA non-coding downstream 294422 54369121 ~ 54371307 (-)
G1563002 NA non-coding downstream 430287 54235048 ~ 54235442 (-)
G1563266 NA non-coding upstream 17348 54684013 ~ 54687483 (-)
G1563284 NA non-coding upstream 53550 54720215 ~ 54720509 (-)
G1563272 NA non-coding upstream 148196 54814861 ~ 54817329 (-)
G1563328 NA non-coding upstream 206121 54872786 ~ 54873168 (-)
G1563369 NA non-coding upstream 268025 54934690 ~ 54934917 (-)
G1563253 NA other downstream 86 54660626 ~ 54665643 (-)
mrpl3 mrpl3 other downstream 770780 53887137 ~ 53895002 (-)
G1562828 NA other downstream 790137 53874410 ~ 53875592 (-)
G1562816 LOC100136012 other downstream 913046 53752406 ~ 53752683 (-)
G1565122 LOC106613431 other upstream 1814803 56481468 ~ 56488289 (-)
G1566899 NA other upstream 3360846 58027511 ~ 58027790 (-)
G1566923 NA other upstream 3408958 58074209 ~ 58078146 (-)
G1566972 NA other upstream 3500719 58167384 ~ 58167697 (-)

Expression


Co-expression Network