Gene
RNA
| Item | Value |
|---|---|
| gene id | G1563284 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54720215 ~ 54720509 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1788627 | True | 295 | lncRNA | 0.49 | 1 | 54720215 | 54720509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496860 | LOC106588819 | coding | downstream | 67283 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 167898 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 402591 | 54316124 ~ 54317624 (-) |
| LOC110496544 | LOC106588813 | coding | downstream | 404570 | 54314224 ~ 54315645 (-) |
| LOC110496543 | LOC106588812 | coding | downstream | 433638 | 54280544 ~ 54286577 (-) |
| LOC110496552 | gmnn | coding | upstream | 107208 | 54827717 ~ 54839922 (-) |
| LOC118941190 | LOC106588825 | coding | upstream | 121925 | 54842434 ~ 54853844 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 1984343 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 2007832 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 2338028 | 57058537 ~ 57061029 (-) |
| G1563266 | NA | non-coding | downstream | 32732 | 54684013 ~ 54687483 (-) |
| G1563255 | NA | non-coding | downstream | 53550 | 54665729 ~ 54666665 (-) |
| G1563234 | NA | non-coding | downstream | 110515 | 54606755 ~ 54609700 (-) |
| G1563217 | NA | non-coding | downstream | 152605 | 54557544 ~ 54567610 (-) |
| G1563100 | NA | non-coding | downstream | 348908 | 54369121 ~ 54371307 (-) |
| G1563272 | NA | non-coding | upstream | 94352 | 54814861 ~ 54817329 (-) |
| G1563328 | NA | non-coding | upstream | 152277 | 54872786 ~ 54873168 (-) |
| G1563369 | NA | non-coding | upstream | 214181 | 54934690 ~ 54934917 (-) |
| G1563370 | NA | non-coding | upstream | 214747 | 54935256 ~ 54935466 (-) |
| G1563372 | NA | non-coding | upstream | 216550 | 54937059 ~ 54937506 (-) |
| G1563253 | NA | other | downstream | 54572 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 825266 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 844623 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 967532 | 53752406 ~ 53752683 (-) |
| G1565122 | LOC106613431 | other | upstream | 1760959 | 56481468 ~ 56488289 (-) |
| G1566899 | NA | other | upstream | 3307002 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 3355114 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 3446875 | 58167384 ~ 58167697 (-) |
