Gene
RNA
| Item | Value |
|---|---|
| gene id | G1562315 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 54733544 ~ 54733822 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1787469 | True | 279 | lncRNA | 0.44 | 1 | 54733544 | 54733822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496550 | LOC106588820 | coding | upstream | 45663 | 54657406 ~ 54687881 (+) |
| LOC110496549 | LOC106588818 | coding | upstream | 98287 | 54631385 ~ 54635257 (+) |
| LOC110496548 | LOC106588817 | coding | upstream | 157100 | 54554378 ~ 54576444 (+) |
| LOC110496545 | LOC106588816 | coding | upstream | 222621 | 54412770 ~ 54510923 (+) |
| LOC110496546 | LOC106588814 | coding | upstream | 323623 | 54322817 ~ 54409921 (+) |
| LOC110496551 | fam65b | coding | downstream | 4431 | 54738253 ~ 54817359 (+) |
| armh2 | cssa27h6orf229 | coding | downstream | 89838 | 54823660 ~ 54827619 (+) |
| tppc3 | tppc3 | coding | downstream | 120084 | 54853906 ~ 54859078 (+) |
| LOC110496553 | LOC106588826 | coding | downstream | 318053 | 55051875 ~ 55171394 (+) |
| LOC110496554 | LOC106588828 | coding | downstream | 439884 | 55173706 ~ 55213167 (+) |
| G1562259 | NA | non-coding | upstream | 17426 | 54597397 ~ 54716118 (+) |
| G1562262 | NA | non-coding | upstream | 80434 | 54639918 ~ 54653110 (+) |
| G1562197 | NA | non-coding | upstream | 181164 | 54529628 ~ 54552380 (+) |
| G1562239 | NA | non-coding | upstream | 199138 | 54533394 ~ 54534406 (+) |
| G1562195 | NA | non-coding | upstream | 205391 | 54526044 ~ 54528153 (+) |
| G1562329 | NA | non-coding | downstream | 11928 | 54745750 ~ 54746189 (+) |
| G1562341 | NA | non-coding | downstream | 30426 | 54764248 ~ 54764638 (+) |
| G1562366 | NA | non-coding | downstream | 71767 | 54805589 ~ 54807370 (+) |
| G1562377 | NA | non-coding | downstream | 96529 | 54830351 ~ 54831448 (+) |
| G1562398 | NA | non-coding | downstream | 128975 | 54862797 ~ 54863017 (+) |
| G1561856 | NA | other | upstream | 856614 | 53872173 ~ 53876930 (+) |
| G1561845 | NA | other | upstream | 892673 | 53817164 ~ 53840871 (+) |
| LOC110514975 | LOC106588804 | other | upstream | 1008880 | 53713836 ~ 53730416 (+) |
| G1561544 | LOC106588750 | other | upstream | 1445079 | 53277790 ~ 53288465 (+) |
| G1563547 | NA | other | downstream | 404826 | 55138648 ~ 55139231 (+) |
| G1564470 | NA | other | downstream | 1174428 | 55908085 ~ 55908934 (+) |
| LOC110496862 | LOC106588838 | other | downstream | 1295116 | 56028870 ~ 56504444 (+) |
| G1564638 | LOC106607612 | other | downstream | 1316766 | 56050588 ~ 56051793 (+) |
| G1565672 | NA | other | downstream | 2297799 | 57031621 ~ 57031963 (+) |
