Gene
RNA
| Item | Value |
|---|---|
| gene id | G1563630 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 55061266 ~ 55064066 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1789000 | False | 281 | lncRNA | 0.31 | 4 | 55061266 | 55064066 |
| TU1789004 | False | 254 | lncRNA | 0.31 | 3 | 55061266 | 55062907 |
| TU1789002 | True | 163 | lncRNA | 0.31 | 2 | 55061747 | 55062319 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941190 | LOC106588825 | coding | downstream | 207422 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 221344 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 408334 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 508949 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 743642 | 54316124 ~ 54317624 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 1640786 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 1664275 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 1994471 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 2003774 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 2009396 | 57073462 ~ 57109628 (-) |
| G1563377 | NA | non-coding | downstream | 117544 | 54943145 ~ 54943722 (-) |
| G1563372 | NA | non-coding | downstream | 123760 | 54937059 ~ 54937506 (-) |
| G1563370 | NA | non-coding | downstream | 125800 | 54935256 ~ 54935466 (-) |
| G1563369 | NA | non-coding | downstream | 126349 | 54934690 ~ 54934917 (-) |
| G1563328 | NA | non-coding | downstream | 188098 | 54872786 ~ 54873168 (-) |
| G1563704 | NA | non-coding | upstream | 100327 | 55164393 ~ 55237210 (-) |
| G1563710 | NA | non-coding | upstream | 117425 | 55181491 ~ 55198928 (-) |
| G1563671 | NA | non-coding | upstream | 127923 | 55191989 ~ 55213158 (-) |
| G1563761 | NA | non-coding | upstream | 224127 | 55288193 ~ 55289118 (-) |
| G1563777 | NA | non-coding | upstream | 250739 | 55314805 ~ 55315301 (-) |
| G1563253 | NA | other | downstream | 395623 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 1166317 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 1185674 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 1308583 | 53752406 ~ 53752683 (-) |
| G1565122 | LOC106613431 | other | upstream | 1417402 | 56481468 ~ 56488289 (-) |
| G1566899 | NA | other | upstream | 2963445 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 3011557 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 3103318 | 58167384 ~ 58167697 (-) |
