Gene
RNA
| Item | Value |
|---|---|
| gene id | G1563547 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 55138648 ~ 55139231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: acidic proline-rich protein PRP25-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1788910 | True | 264 | TUCP | 0.48 | 2 | 55138648 | 55139231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tppc3 | tppc3 | coding | upstream | 279570 | 54853906 ~ 54859078 (+) |
| armh2 | cssa27h6orf229 | coding | upstream | 311029 | 54823660 ~ 54827619 (+) |
| LOC110496551 | fam65b | coding | upstream | 321289 | 54738253 ~ 54817359 (+) |
| LOC110496550 | LOC106588820 | coding | upstream | 450767 | 54657406 ~ 54687881 (+) |
| LOC110496549 | LOC106588818 | coding | upstream | 503391 | 54631385 ~ 54635257 (+) |
| LOC110496554 | LOC106588828 | coding | downstream | 34475 | 55173706 ~ 55213167 (+) |
| LOC110496862 | LOC106588838 | coding | downstream | 889639 | 56028870 ~ 56504444 (+) |
| LOC110496558 | LOC106588839 | coding | downstream | 1430129 | 56569360 ~ 56704104 (+) |
| LOC110496561 | LOC106588843 | coding | downstream | 1682303 | 56821534 ~ 56833489 (+) |
| LOC110496562 | LOC106588845 | coding | downstream | 1705942 | 56845173 ~ 56849827 (+) |
| G1563478 | NA | non-coding | upstream | 92043 | 55046405 ~ 55046605 (+) |
| G1563371 | NA | non-coding | upstream | 201162 | 54936824 ~ 54937486 (+) |
| G1562398 | NA | non-coding | upstream | 275631 | 54862797 ~ 54863017 (+) |
| G1562377 | NA | non-coding | upstream | 307200 | 54830351 ~ 54831448 (+) |
| G1562366 | NA | non-coding | upstream | 331278 | 54805589 ~ 54807370 (+) |
| G1563607 | NA | non-coding | downstream | 146713 | 55285944 ~ 55287562 (+) |
| G1563621 | NA | non-coding | downstream | 169194 | 55308425 ~ 55308791 (+) |
| G1563773 | NA | non-coding | downstream | 174226 | 55313457 ~ 55313770 (+) |
| G1563780 | NA | non-coding | downstream | 179033 | 55318264 ~ 55318516 (+) |
| G1563798 | NA | non-coding | downstream | 190402 | 55329633 ~ 55329929 (+) |
| LOC110496545 | LOC106588816 | other | upstream | 627902 | 54412770 ~ 54510923 (+) |
| G1561856 | NA | other | upstream | 1261718 | 53872173 ~ 53876930 (+) |
| G1561845 | NA | other | upstream | 1297777 | 53817164 ~ 53840871 (+) |
| LOC110514975 | LOC106588804 | other | upstream | 1413984 | 53713836 ~ 53730416 (+) |
| G1561544 | LOC106588750 | other | upstream | 1850183 | 53277790 ~ 53288465 (+) |
| G1564470 | NA | other | downstream | 769019 | 55908085 ~ 55908934 (+) |
| G1564638 | LOC106607612 | other | downstream | 911357 | 56050588 ~ 56051793 (+) |
| G1565672 | NA | other | downstream | 1892390 | 57031621 ~ 57031963 (+) |
| LOC110496571 | hoxa7aa | other | downstream | 1969897 | 57109128 ~ 57112335 (+) |
