G1563710


Basic Information

Item Value
gene id G1563710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 55181491 ~ 55198928 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1789097
actggcaatactaaagtgcctataagaacatccaatagtcaaaggtgtatatgaaatacaaatggtatagagggaaatagtcctataataactacaacctaaaacttcttacctgggaatattgaagactcatgttaaaaggaaccaccagatttcatatgttctcatgttctgagcaaggaactgaaacattagctttcttacatggcacatattgcacttttactttcttctccaacactttgtttttgcattatttaaaccgaattgaacatgtttcattatttacttgagggtaaattgattttattgatttattatataataagttaaaataagtgttcattcagtagttgtaattgtcattattattatttatttttttattattatttaatttttttattctattttttttgtcttaaaatcggccgattaattagTATCGGCTTTTTCGGTCCTCCAATAAAAtcagtatcggcattgaaaaatctgATTGATGAACATACTGTTGATTCTGCTCACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1789097 True 526 lncRNA 0.29 2 55181491 55198928

Neighbor

gene id symbol gene type direction distance location
LOC118941190 LOC106588825 coding downstream 327647 54842434 ~ 54853844 (-)
LOC110496552 gmnn coding downstream 341569 54827717 ~ 54839922 (-)
LOC110496860 LOC106588819 coding downstream 528559 54636849 ~ 54652932 (-)
tpd52 tpd52 coding downstream 629174 54525693 ~ 54552317 (-)
LOC118941189 mrpl53 coding downstream 863867 54316124 ~ 54317624 (-)
LOC110496559 LOC106570512 coding upstream 1505924 56704852 ~ 56726308 (-)
LOC110496560 LOC106588840 coding upstream 1529413 56728341 ~ 56737381 (-)
LOC110496863 NA coding upstream 1859609 57058537 ~ 57061029 (-)
LOC110496566 hoxa2ab coding upstream 1868912 57067840 ~ 57070602 (-)
LOC110496565 hoxa3ab coding upstream 1874534 57073462 ~ 57109628 (-)
G1563630 NA non-coding downstream 117425 55061266 ~ 55064066 (-)
G1563377 NA non-coding downstream 237769 54943145 ~ 54943722 (-)
G1563372 NA non-coding downstream 243985 54937059 ~ 54937506 (-)
G1563370 NA non-coding downstream 246025 54935256 ~ 54935466 (-)
G1563369 NA non-coding downstream 246574 54934690 ~ 54934917 (-)
G1563761 NA non-coding upstream 89265 55288193 ~ 55289118 (-)
G1563777 NA non-coding upstream 115877 55314805 ~ 55315301 (-)
G1563779 NA non-coding upstream 118872 55317800 ~ 55318086 (-)
G1563969 NA non-coding upstream 218785 55417713 ~ 55420680 (-)
G1563971 NA non-coding upstream 226051 55424979 ~ 55433774 (-)
G1563253 NA other downstream 515848 54660626 ~ 54665643 (-)
mrpl3 mrpl3 other downstream 1286542 53887137 ~ 53895002 (-)
G1562828 NA other downstream 1305899 53874410 ~ 53875592 (-)
G1562816 LOC100136012 other downstream 1428808 53752406 ~ 53752683 (-)
G1565122 LOC106613431 other upstream 1282540 56481468 ~ 56488289 (-)
G1566899 NA other upstream 2828583 58027511 ~ 58027790 (-)
G1566923 NA other upstream 2876695 58074209 ~ 58078146 (-)
G1566972 NA other upstream 2968456 58167384 ~ 58167697 (-)

Expression


Co-expression Network