G1564468


Basic Information

Item Value
gene id G1564468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 55906567 ~ 55906796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1789917
AGCATATGCAGTGTGATTTAGcgtgcgcccagtgtaaggctcctaggcacctgcccagagggaagctacaccccttacccgttccacaacggccttggtcgcacctgtcggtagATTTTCCTACCAATCTTCCCCCcacacagggtaacaccacgatcctggttgttgtggatcggttctctaagtcctgtcgtctcctccctctgcccggtctccctacagccctacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1789917 True 230 lncRNA 0.57 1 55906567 55906796

Neighbor

gene id symbol gene type direction distance location
LOC110496554 LOC106588828 coding upstream 693400 55173706 ~ 55213167 (+)
LOC110496553 LOC106588826 coding upstream 735173 55051875 ~ 55171394 (+)
tppc3 tppc3 coding upstream 1047489 54853906 ~ 54859078 (+)
armh2 cssa27h6orf229 coding upstream 1078948 54823660 ~ 54827619 (+)
LOC110496551 fam65b coding upstream 1089208 54738253 ~ 54817359 (+)
LOC110496862 LOC106588838 coding downstream 122074 56028870 ~ 56504444 (+)
LOC110496558 LOC106588839 coding downstream 662564 56569360 ~ 56704104 (+)
LOC110496561 LOC106588843 coding downstream 914738 56821534 ~ 56833489 (+)
LOC110496562 LOC106588845 coding downstream 938377 56845173 ~ 56849827 (+)
LOC110496564 LOC106588844 coding downstream 954701 56861497 ~ 56876018 (+)
G1564456 NA non-coding upstream 8002 55876155 ~ 55898565 (+)
G1564455 NA non-coding upstream 21580 55872725 ~ 55884987 (+)
G1564457 NA non-coding upstream 24040 55881831 ~ 55882527 (+)
G1564454 NA non-coding upstream 34053 55872294 ~ 55872514 (+)
G1564421 NA non-coding upstream 59781 55845927 ~ 55846786 (+)
G1564470 NA non-coding downstream 1289 55908085 ~ 55908934 (+)
G1564471 NA non-coding downstream 2761 55909557 ~ 55910106 (+)
G1564492 NA non-coding downstream 41947 55948743 ~ 55950874 (+)
G1564643 NA non-coding downstream 149610 56056406 ~ 56146707 (+)
G1564711 NA non-coding downstream 266208 56173004 ~ 56173206 (+)
G1563547 NA other upstream 767336 55138648 ~ 55139231 (+)
LOC110496545 LOC106588816 other upstream 1395821 54412770 ~ 54510923 (+)
G1561856 NA other upstream 2029637 53872173 ~ 53876930 (+)
G1561845 NA other upstream 2065696 53817164 ~ 53840871 (+)
LOC110514975 LOC106588804 other upstream 2181903 53713836 ~ 53730416 (+)
G1564638 LOC106607612 other downstream 143792 56050588 ~ 56051793 (+)
G1565672 NA other downstream 1124825 57031621 ~ 57031963 (+)
LOC110496571 hoxa7aa other downstream 1202332 57109128 ~ 57112335 (+)

Expression


Co-expression Network