Gene
RNA
| Item | Value |
|---|---|
| gene id | G1564536 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 55944542 ~ 55944823 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1790009 | True | 282 | lncRNA | 0.42 | 1 | 55944542 | 55944823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941190 | LOC106588825 | coding | downstream | 1090698 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 1104620 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 1291610 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 1392225 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 1626918 | 54316124 ~ 54317624 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 760029 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 783518 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 1113714 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 1123017 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 1128639 | 57073462 ~ 57109628 (-) |
| G1564532 | NA | non-coding | downstream | 5455 | 55938851 ~ 55939087 (-) |
| G1564520 | NA | non-coding | downstream | 40204 | 55901500 ~ 55904338 (-) |
| G1564517 | NA | non-coding | downstream | 47135 | 55896883 ~ 55897407 (-) |
| G1564507 | NA | non-coding | downstream | 66724 | 55874603 ~ 55877818 (-) |
| G1564508 | NA | non-coding | downstream | 67362 | 55875467 ~ 55877180 (-) |
| G1564538 | NA | non-coding | upstream | 3921 | 55948744 ~ 55977098 (-) |
| G1564557 | NA | non-coding | upstream | 37736 | 55982559 ~ 55982778 (-) |
| G1564560 | NA | non-coding | upstream | 38274 | 55983097 ~ 55983344 (-) |
| G1564563 | NA | non-coding | upstream | 43389 | 55988212 ~ 55988556 (-) |
| G1564606 | NA | non-coding | upstream | 78954 | 56023777 ~ 56024130 (-) |
| G1563253 | NA | other | downstream | 1278899 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 2049593 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 2068950 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 2191859 | 53752406 ~ 53752683 (-) |
| G1565122 | LOC106613431 | other | upstream | 536645 | 56481468 ~ 56488289 (-) |
| G1566899 | NA | other | upstream | 2082688 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 2130800 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 2222561 | 58167384 ~ 58167697 (-) |
