Gene
RNA
| Item | Value |
|---|---|
| gene id | G1564538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 55948744 ~ 55977098 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1790011 | True | 215 | lncRNA | 0.39 | 2 | 55948744 | 55977098 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941190 | LOC106588825 | coding | downstream | 1094900 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 1108822 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 1295812 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 1396427 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 1631120 | 54316124 ~ 54317624 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 727754 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 751243 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 1081439 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 1090742 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 1096364 | 57073462 ~ 57109628 (-) |
| G1564536 | NA | non-coding | downstream | 3921 | 55944542 ~ 55944823 (-) |
| G1564532 | NA | non-coding | downstream | 9657 | 55938851 ~ 55939087 (-) |
| G1564520 | NA | non-coding | downstream | 44406 | 55901500 ~ 55904338 (-) |
| G1564517 | NA | non-coding | downstream | 51337 | 55896883 ~ 55897407 (-) |
| G1564507 | NA | non-coding | downstream | 70926 | 55874603 ~ 55877818 (-) |
| G1564557 | NA | non-coding | upstream | 5461 | 55982559 ~ 55982778 (-) |
| G1564560 | NA | non-coding | upstream | 5999 | 55983097 ~ 55983344 (-) |
| G1564563 | NA | non-coding | upstream | 11114 | 55988212 ~ 55988556 (-) |
| G1564606 | NA | non-coding | upstream | 46679 | 56023777 ~ 56024130 (-) |
| G1564613 | NA | non-coding | upstream | 50434 | 56027532 ~ 56027850 (-) |
| G1563253 | NA | other | downstream | 1283101 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 2053795 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 2073152 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 2196061 | 53752406 ~ 53752683 (-) |
| G1565122 | LOC106613431 | other | upstream | 504370 | 56481468 ~ 56488289 (-) |
| G1566899 | NA | other | upstream | 2050413 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 2098525 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 2190286 | 58167384 ~ 58167697 (-) |
