G1564726


Basic Information

Item Value
gene id G1564726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 56189708 ~ 56190328 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1790211
tagaaatactcctcagtttcatcaactgtctgggtggctggtctcaaacgatcccgcaggtgaagaagatggatgtggaggtcctgggctgcgaGGTCTTCGGTTGCgaggttggacatactgccaaattatctaaaacaacattggaggcagcttatggtacattccattctctggcaacaactctggtgggcattcctgcagtcagcatgccagttacacactccctcaaagacatctgtggcattgtgctggttgatgaaaatgcacattttaaagtggccatttattgtccccagcacaaggtgcacctgtgtaatggtcatgctgtttaatcagcttcttgatatgccacacctgtcaggttgatAGATTATCTTGgtgaaggagaaaggagaaatgctcactaacagggatgttaacaacATGTTAGAGAaacaagctttttgtgtgtatggaacatttctgggatattttatttcagctcatgaaacatgggcccaacactttacatgttgcatttatatttttgttcagtctatggacctgtgtgggtgtgtatgtgctGTGTTGGGGCTGGGCCTTACAGCAGATCTGAAAGGGGTTAGCACTGATACAAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1790211 True 621 lncRNA 0.45 1 56189708 56190328

Neighbor

gene id symbol gene type direction distance location
LOC110496554 LOC106588828 coding upstream 976541 55173706 ~ 55213167 (+)
LOC110496553 LOC106588826 coding upstream 1018314 55051875 ~ 55171394 (+)
tppc3 tppc3 coding upstream 1330630 54853906 ~ 54859078 (+)
armh2 cssa27h6orf229 coding upstream 1362089 54823660 ~ 54827619 (+)
LOC110496551 fam65b coding upstream 1372349 54738253 ~ 54817359 (+)
LOC110496558 LOC106588839 coding downstream 379032 56569360 ~ 56704104 (+)
LOC110496561 LOC106588843 coding downstream 631206 56821534 ~ 56833489 (+)
LOC110496562 LOC106588845 coding downstream 654845 56845173 ~ 56849827 (+)
LOC110496564 LOC106588844 coding downstream 671169 56861497 ~ 56876018 (+)
LOC110496570 NA coding downstream 895353 57085681 ~ 57087010 (+)
G1564720 NA non-coding upstream 5217 56184261 ~ 56184491 (+)
G1564711 NA non-coding upstream 16502 56173004 ~ 56173206 (+)
G1564643 NA non-coding upstream 43001 56056406 ~ 56146707 (+)
G1564492 NA non-coding upstream 238834 55948743 ~ 55950874 (+)
G1564471 NA non-coding upstream 279602 55909557 ~ 55910106 (+)
G1564832 NA non-coding downstream 170653 56360981 ~ 56361211 (+)
G1564870 NA non-coding downstream 240192 56430520 ~ 56430792 (+)
G1564880 NA non-coding downstream 264576 56454904 ~ 56459925 (+)
G1564888 NA non-coding downstream 279323 56469651 ~ 56469854 (+)
G1564889 NA non-coding downstream 281142 56471470 ~ 56471691 (+)
LOC110496862 LOC106588838 other upstream 20505 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other upstream 137915 56050588 ~ 56051793 (+)
G1564470 NA other upstream 280774 55908085 ~ 55908934 (+)
G1563547 NA other upstream 1050477 55138648 ~ 55139231 (+)
LOC110496545 LOC106588816 other upstream 1678962 54412770 ~ 54510923 (+)
G1565672 NA other downstream 841293 57031621 ~ 57031963 (+)
LOC110496571 hoxa7aa other downstream 918800 57109128 ~ 57112335 (+)
LOC110496591 LOC106588881 other downstream 1660893 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 1726287 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 1750769 57941097 ~ 57946763 (+)

Expression


Co-expression Network