Gene
RNA
| Item | Value |
|---|---|
| gene id | G1564992 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56190320 ~ 56190532 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1790490 | True | 213 | lncRNA | 0.40 | 1 | 56190320 | 56190532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941190 | LOC106588825 | coding | downstream | 1336476 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 1350398 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 1537388 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 1638003 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 1872696 | 54316124 ~ 54317624 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 514320 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 537809 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 868005 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 877308 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 882930 | 57073462 ~ 57109628 (-) |
| G1564991 | NA | non-coding | downstream | 1688 | 56188358 ~ 56188632 (-) |
| G1564613 | NA | non-coding | downstream | 162470 | 56027532 ~ 56027850 (-) |
| G1564606 | NA | non-coding | downstream | 166190 | 56023777 ~ 56024130 (-) |
| G1564563 | NA | non-coding | downstream | 201764 | 55988212 ~ 55988556 (-) |
| G1564560 | NA | non-coding | downstream | 206976 | 55983097 ~ 55983344 (-) |
| G1564993 | NA | non-coding | upstream | 353 | 56190885 ~ 56191203 (-) |
| G1564997 | NA | non-coding | upstream | 7066 | 56197598 ~ 56197797 (-) |
| G1565070 | NA | non-coding | upstream | 139084 | 56329616 ~ 56329883 (-) |
| G1565097 | NA | non-coding | upstream | 172970 | 56363502 ~ 56363811 (-) |
| G1565125 | NA | non-coding | upstream | 215954 | 56406486 ~ 56408664 (-) |
| G1563253 | NA | other | downstream | 1524677 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 2295371 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 2314728 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 2437637 | 53752406 ~ 53752683 (-) |
| G1565122 | LOC106613431 | other | upstream | 290936 | 56481468 ~ 56488289 (-) |
| G1566899 | NA | other | upstream | 1836979 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 1885091 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1976852 | 58167384 ~ 58167697 (-) |
