Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565163 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56464851 ~ 56465162 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1790668 | True | 312 | lncRNA | 0.41 | 1 | 56464851 | 56465162 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941190 | LOC106588825 | coding | downstream | 1611007 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 1624929 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 1811919 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 1912534 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 2147227 | 54316124 ~ 54317624 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 239690 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 263179 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 593375 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 602678 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 608300 | 57073462 ~ 57109628 (-) |
| G1565148 | NA | non-coding | downstream | 1276 | 56462935 ~ 56463575 (-) |
| G1565125 | NA | non-coding | downstream | 56187 | 56406486 ~ 56408664 (-) |
| G1565097 | NA | non-coding | downstream | 101040 | 56363502 ~ 56363811 (-) |
| G1565070 | NA | non-coding | downstream | 134968 | 56329616 ~ 56329883 (-) |
| G1564997 | NA | non-coding | downstream | 267054 | 56197598 ~ 56197797 (-) |
| G1565171 | NA | non-coding | upstream | 27495 | 56492657 ~ 56496239 (-) |
| G1565146 | NA | non-coding | upstream | 37134 | 56502296 ~ 56504360 (-) |
| G1565178 | NA | non-coding | upstream | 45064 | 56510226 ~ 56510436 (-) |
| G1565322 | NA | non-coding | upstream | 98053 | 56563215 ~ 56563496 (-) |
| G1565323 | NA | non-coding | upstream | 101934 | 56567096 ~ 56567331 (-) |
| G1563253 | NA | other | downstream | 1799208 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 2569902 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 2589259 | 53874410 ~ 53875592 (-) |
| G1562816 | LOC100136012 | other | downstream | 2712168 | 53752406 ~ 53752683 (-) |
| G1565122 | LOC106613431 | other | upstream | 16306 | 56481468 ~ 56488289 (-) |
| G1566899 | NA | other | upstream | 1562349 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 1610461 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1702222 | 58167384 ~ 58167697 (-) |
