Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565401 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56696822 ~ 56697137 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1790930 | False | 249 | lncRNA | 0.42 | 2 | 56696822 | 56697137 |
| TU1790931 | True | 249 | lncRNA | 0.42 | 2 | 56696822 | 56697137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941190 | LOC106588825 | coding | downstream | 1842978 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 1856900 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 2043890 | 54636849 ~ 54652932 (-) |
| tpd52 | tpd52 | coding | downstream | 2144505 | 54525693 ~ 54552317 (-) |
| LOC118941189 | mrpl53 | coding | downstream | 2379198 | 54316124 ~ 54317624 (-) |
| LOC110496559 | LOC106570512 | coding | upstream | 7715 | 56704852 ~ 56726308 (-) |
| LOC110496560 | LOC106588840 | coding | upstream | 31204 | 56728341 ~ 56737381 (-) |
| LOC110496863 | NA | coding | upstream | 361400 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 370703 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 376325 | 57073462 ~ 57109628 (-) |
| G1565323 | NA | non-coding | downstream | 129491 | 56567096 ~ 56567331 (-) |
| G1565322 | NA | non-coding | downstream | 133326 | 56563215 ~ 56563496 (-) |
| G1565178 | NA | non-coding | downstream | 186386 | 56510226 ~ 56510436 (-) |
| G1565146 | NA | non-coding | downstream | 192462 | 56502296 ~ 56504360 (-) |
| G1565171 | NA | non-coding | downstream | 200583 | 56492657 ~ 56496239 (-) |
| G1565404 | NA | non-coding | upstream | 4291 | 56701428 ~ 56704109 (-) |
| G1565461 | NA | non-coding | upstream | 82817 | 56779954 ~ 56780159 (-) |
| G1565536 | LOC106588845 | non-coding | upstream | 148137 | 56845274 ~ 56849179 (-) |
| G1565574 | NA | non-coding | upstream | 199062 | 56896199 ~ 56896418 (-) |
| G1565575 | NA | non-coding | upstream | 200406 | 56897543 ~ 56897751 (-) |
| G1565122 | LOC106613431 | other | downstream | 208533 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2031179 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 2801873 | 53887137 ~ 53895002 (-) |
| G1562828 | NA | other | downstream | 2821230 | 53874410 ~ 53875592 (-) |
| G1566899 | NA | other | upstream | 1330374 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 1378486 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1470247 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1713362 | 58410499 ~ 58411129 (-) |
