Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56748332 ~ 56749389 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1790832 | True | 467 | lncRNA | 0.45 | 2 | 56748332 | 56749389 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496558 | LOC106588839 | coding | upstream | 44228 | 56569360 ~ 56704104 (+) |
| LOC110496862 | LOC106588838 | coding | upstream | 246741 | 56028870 ~ 56504444 (+) |
| LOC110496554 | LOC106588828 | coding | upstream | 1535165 | 55173706 ~ 55213167 (+) |
| LOC110496553 | LOC106588826 | coding | upstream | 1576938 | 55051875 ~ 55171394 (+) |
| tppc3 | tppc3 | coding | upstream | 1889254 | 54853906 ~ 54859078 (+) |
| LOC110496561 | LOC106588843 | coding | downstream | 72145 | 56821534 ~ 56833489 (+) |
| LOC110496562 | LOC106588845 | coding | downstream | 95784 | 56845173 ~ 56849827 (+) |
| LOC110496564 | LOC106588844 | coding | downstream | 112108 | 56861497 ~ 56876018 (+) |
| LOC110496570 | NA | coding | downstream | 336292 | 57085681 ~ 57087010 (+) |
| LOC110496572 | NA | coding | downstream | 339163 | 57088552 ~ 57099306 (+) |
| G1565273 | NA | non-coding | upstream | 51198 | 56696860 ~ 56697134 (+) |
| G1564900 | NA | non-coding | upstream | 239845 | 56508284 ~ 56508487 (+) |
| G1564896 | NA | non-coding | upstream | 243015 | 56505108 ~ 56505317 (+) |
| G1564616 | LOC106613431 | non-coding | upstream | 261878 | 56479366 ~ 56486454 (+) |
| G1564892 | NA | non-coding | upstream | 274197 | 56473866 ~ 56474135 (+) |
| G1565476 | NA | non-coding | downstream | 58482 | 56807871 ~ 56808352 (+) |
| G1565483 | NA | non-coding | downstream | 67138 | 56816527 ~ 56816809 (+) |
| G1565523 | NA | non-coding | downstream | 139258 | 56888647 ~ 56888928 (+) |
| G1565524 | NA | non-coding | downstream | 139690 | 56889079 ~ 56889329 (+) |
| G1565529 | NA | non-coding | downstream | 150775 | 56900164 ~ 56900477 (+) |
| G1564638 | LOC106607612 | other | upstream | 696539 | 56050588 ~ 56051793 (+) |
| G1564470 | NA | other | upstream | 839398 | 55908085 ~ 55908934 (+) |
| G1563547 | NA | other | upstream | 1609101 | 55138648 ~ 55139231 (+) |
| LOC110496545 | LOC106588816 | other | upstream | 2237586 | 54412770 ~ 54510923 (+) |
| G1565672 | NA | other | downstream | 282232 | 57031621 ~ 57031963 (+) |
| LOC110496571 | hoxa7aa | other | downstream | 359739 | 57109128 ~ 57112335 (+) |
| LOC110496591 | LOC106588881 | other | downstream | 1101832 | 57851179 ~ 57870361 (+) |
| LOC110496592 | LOC106588883 | other | downstream | 1167226 | 57893854 ~ 57935297 (+) |
| G1566224 | tbc1d5 | other | downstream | 1191708 | 57941097 ~ 57946763 (+) |
