Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565574 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 56896199 ~ 56896418 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791117 | True | 220 | lncRNA | 0.36 | 1 | 56896199 | 56896418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496560 | LOC106588840 | coding | downstream | 158818 | 56728341 ~ 56737381 (-) |
| LOC110496559 | LOC106570512 | coding | downstream | 169891 | 56704852 ~ 56726308 (-) |
| LOC118941190 | LOC106588825 | coding | downstream | 2042355 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 2056277 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 2243267 | 54636849 ~ 54652932 (-) |
| LOC110496863 | NA | coding | upstream | 162119 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 171422 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 177044 | 57073462 ~ 57109628 (-) |
| LOC110496568 | hoxa4aa | coding | upstream | 194369 | 57090787 ~ 57094267 (-) |
| LOC110496567 | hoxa5aa | coding | upstream | 205808 | 57102226 ~ 57105455 (-) |
| G1565536 | LOC106588845 | non-coding | downstream | 47020 | 56845274 ~ 56849179 (-) |
| G1565461 | NA | non-coding | downstream | 116040 | 56779954 ~ 56780159 (-) |
| G1565404 | NA | non-coding | downstream | 192090 | 56701428 ~ 56704109 (-) |
| G1565401 | NA | non-coding | downstream | 199062 | 56696822 ~ 56697137 (-) |
| G1565323 | NA | non-coding | downstream | 328868 | 56567096 ~ 56567331 (-) |
| G1565575 | NA | non-coding | upstream | 1125 | 56897543 ~ 56897751 (-) |
| G1565638 | NA | non-coding | upstream | 101020 | 56997438 ~ 56997665 (-) |
| G1565645 | NA | non-coding | upstream | 105551 | 57001969 ~ 57002191 (-) |
| G1565647 | NA | non-coding | upstream | 105986 | 57002404 ~ 57002628 (-) |
| G1565648 | NA | non-coding | upstream | 106544 | 57002962 ~ 57003538 (-) |
| G1565122 | LOC106613431 | other | downstream | 407910 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2230556 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 3001250 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 1131093 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 1179205 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1270966 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1514081 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1972945 | 58869363 ~ 58870007 (-) |
