G1565529


Basic Information

Item Value
gene id G1565529
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 56900164 ~ 56900477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791067
attatctatcctgatgcctagttacTTCACCCAGTCTTCATGTACATGTCTACCTAaaataccttgtacccctgcataGTGTCTgataccggtactccctgttaggttaattgacatcatttgagtccattgtcggtgtacctgtggatgtatttcaaggcctaccttcaaactcagtgcctctttgcttgacatgggaaaatcaaaagaaatcagccaagacctccacaagtctggttcatccttgggagcaatttccaaacacctgaaggtgccacgttcatctctacaaacaatagtacgcaactataaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791067 True 314 lncRNA 0.43 1 56900164 56900477

Neighbor

gene id symbol gene type direction distance location
LOC110496564 LOC106588844 coding upstream 24146 56861497 ~ 56876018 (+)
LOC110496562 LOC106588845 coding upstream 50337 56845173 ~ 56849827 (+)
LOC110496561 LOC106588843 coding upstream 66675 56821534 ~ 56833489 (+)
LOC110496558 LOC106588839 coding upstream 196060 56569360 ~ 56704104 (+)
LOC110496862 LOC106588838 coding upstream 398573 56028870 ~ 56504444 (+)
LOC110496570 NA coding downstream 185204 57085681 ~ 57087010 (+)
LOC110496572 NA coding downstream 188075 57088552 ~ 57099306 (+)
LOC110496571 hoxa7aa coding downstream 208877 57109128 ~ 57112335 (+)
LOC110496577 NA coding downstream 237011 57137204 ~ 57140625 (+)
LOC110496950 LOC106588852 coding downstream 262648 57163125 ~ 57167993 (+)
G1565524 NA non-coding upstream 10835 56889079 ~ 56889329 (+)
G1565523 NA non-coding upstream 11236 56888647 ~ 56888928 (+)
G1565483 NA non-coding upstream 83355 56816527 ~ 56816809 (+)
G1565476 NA non-coding upstream 91812 56807871 ~ 56808352 (+)
G1565206 NA non-coding upstream 134748 56725947 ~ 56765416 (+)
G1565533 NA non-coding downstream 5046 56905523 ~ 56905833 (+)
G1565639 NA non-coding downstream 98260 56998737 ~ 56999042 (+)
G1565646 NA non-coding downstream 101800 57002277 ~ 57002658 (+)
G1565678 NA non-coding downstream 134924 57035401 ~ 57035629 (+)
G1565692 NA non-coding downstream 143289 57043766 ~ 57043980 (+)
G1564638 LOC106607612 other upstream 848371 56050588 ~ 56051793 (+)
G1564470 NA other upstream 991230 55908085 ~ 55908934 (+)
G1563547 NA other upstream 1760933 55138648 ~ 55139231 (+)
LOC110496545 LOC106588816 other upstream 2389418 54412770 ~ 54510923 (+)
G1565672 NA other downstream 131144 57031621 ~ 57031963 (+)
LOC110496591 LOC106588881 other downstream 950744 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 1016138 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 1040620 57941097 ~ 57946763 (+)

Expression


Co-expression Network