G1565533


Basic Information

Item Value
gene id G1565533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 56905523 ~ 56905833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791071
ccacccagtaccctgccctgaaccttagtcactgttctagttgatctccacccagtaccctgccctgaaccttagtcactgttctagctgacctccacccggtaccctgccctgaaccttagtgactgttctagctgacctccacccagtaccctgccctgaaccttagtcactgttctagctgacctccacccagtaccctgccctgaaacGTGGTCACTGTTCTAgctgacctccacccagtaccctgccctgaaccttagtcactgttctagtTGACCTCcatccagtaccctgccctgaaccttagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791071 True 311 lncRNA 0.55 1 56905523 56905833

Neighbor

gene id symbol gene type direction distance location
LOC110496564 LOC106588844 coding upstream 29505 56861497 ~ 56876018 (+)
LOC110496562 LOC106588845 coding upstream 55696 56845173 ~ 56849827 (+)
LOC110496561 LOC106588843 coding upstream 72034 56821534 ~ 56833489 (+)
LOC110496558 LOC106588839 coding upstream 201419 56569360 ~ 56704104 (+)
LOC110496862 LOC106588838 coding upstream 403932 56028870 ~ 56504444 (+)
LOC110496570 NA coding downstream 179848 57085681 ~ 57087010 (+)
LOC110496572 NA coding downstream 182719 57088552 ~ 57099306 (+)
LOC110496571 hoxa7aa coding downstream 203521 57109128 ~ 57112335 (+)
LOC110496577 NA coding downstream 231655 57137204 ~ 57140625 (+)
LOC110496950 LOC106588852 coding downstream 257292 57163125 ~ 57167993 (+)
G1565529 NA non-coding upstream 5046 56900164 ~ 56900477 (+)
G1565524 NA non-coding upstream 16194 56889079 ~ 56889329 (+)
G1565523 NA non-coding upstream 16595 56888647 ~ 56888928 (+)
G1565483 NA non-coding upstream 88714 56816527 ~ 56816809 (+)
G1565476 NA non-coding upstream 97171 56807871 ~ 56808352 (+)
G1565639 NA non-coding downstream 92904 56998737 ~ 56999042 (+)
G1565646 NA non-coding downstream 96444 57002277 ~ 57002658 (+)
G1565678 NA non-coding downstream 129568 57035401 ~ 57035629 (+)
G1565692 NA non-coding downstream 137933 57043766 ~ 57043980 (+)
G1565723 NA non-coding downstream 159143 57064976 ~ 57065308 (+)
G1564638 LOC106607612 other upstream 853730 56050588 ~ 56051793 (+)
G1564470 NA other upstream 996589 55908085 ~ 55908934 (+)
G1563547 NA other upstream 1766292 55138648 ~ 55139231 (+)
LOC110496545 LOC106588816 other upstream 2394777 54412770 ~ 54510923 (+)
G1565672 NA other downstream 125788 57031621 ~ 57031963 (+)
LOC110496591 LOC106588881 other downstream 945388 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 1010782 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 1035264 57941097 ~ 57946763 (+)

Expression


Co-expression Network