G1565646


Basic Information

Item Value
gene id G1565646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57002277 ~ 57002658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791193
gttcttcactggttgcccttttctcgtggcaacaggtcacaaatattgctgctgtgatggcacactgtggaatttcacccagtagatatgggagtttttcaaaattggatttgttttcgaattctttgtggatctgtgtaatctgagggaaatatgtctctctaatatggtcatacattgggcaggaggttaggaagtgcagctcagtttccacctcattttgtgggcagtgagcacatagcctgtcttcttttgagagccatgtctgcctacggcggcctttctcaatagcaaggctatgctcactgagtctgtacatagtcaaagctttccttaattttgggtcagtcacagtggtcaggtgttctgccattgtgtactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791193 True 382 lncRNA 0.45 1 57002277 57002658

Neighbor

gene id symbol gene type direction distance location
LOC110496564 LOC106588844 coding upstream 126259 56861497 ~ 56876018 (+)
LOC110496562 LOC106588845 coding upstream 152450 56845173 ~ 56849827 (+)
LOC110496561 LOC106588843 coding upstream 168788 56821534 ~ 56833489 (+)
LOC110496558 LOC106588839 coding upstream 298173 56569360 ~ 56704104 (+)
LOC110496862 LOC106588838 coding upstream 500686 56028870 ~ 56504444 (+)
LOC110496570 NA coding downstream 83023 57085681 ~ 57087010 (+)
LOC110496572 NA coding downstream 85894 57088552 ~ 57099306 (+)
LOC110496571 hoxa7aa coding downstream 106696 57109128 ~ 57112335 (+)
LOC110496577 NA coding downstream 134830 57137204 ~ 57140625 (+)
LOC110496950 LOC106588852 coding downstream 160467 57163125 ~ 57167993 (+)
G1565639 NA non-coding upstream 3235 56998737 ~ 56999042 (+)
G1565533 NA non-coding upstream 96444 56905523 ~ 56905833 (+)
G1565529 NA non-coding upstream 101800 56900164 ~ 56900477 (+)
G1565524 NA non-coding upstream 112948 56889079 ~ 56889329 (+)
G1565523 NA non-coding upstream 113349 56888647 ~ 56888928 (+)
G1565678 NA non-coding downstream 32743 57035401 ~ 57035629 (+)
G1565692 NA non-coding downstream 41108 57043766 ~ 57043980 (+)
G1565723 NA non-coding downstream 62318 57064976 ~ 57065308 (+)
G1565728 NA non-coding downstream 65277 57067935 ~ 57068942 (+)
G1565726 hoxa3ab non-coding downstream 75892 57078550 ~ 57079129 (+)
G1564638 LOC106607612 other upstream 950484 56050588 ~ 56051793 (+)
G1564470 NA other upstream 1093343 55908085 ~ 55908934 (+)
G1563547 NA other upstream 1863046 55138648 ~ 55139231 (+)
LOC110496545 LOC106588816 other upstream 2491531 54412770 ~ 54510923 (+)
G1565672 NA other downstream 28963 57031621 ~ 57031963 (+)
LOC110496591 LOC106588881 other downstream 848563 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 913957 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 938439 57941097 ~ 57946763 (+)

Expression


Co-expression Network