Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565658 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57018769 ~ 57018968 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791205 | True | 200 | lncRNA | 0.51 | 1 | 57018769 | 57018968 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496560 | LOC106588840 | coding | downstream | 281388 | 56728341 ~ 56737381 (-) |
| LOC110496559 | LOC106570512 | coding | downstream | 292461 | 56704852 ~ 56726308 (-) |
| LOC118941190 | LOC106588825 | coding | downstream | 2164925 | 54842434 ~ 54853844 (-) |
| LOC110496552 | gmnn | coding | downstream | 2178847 | 54827717 ~ 54839922 (-) |
| LOC110496860 | LOC106588819 | coding | downstream | 2365837 | 54636849 ~ 54652932 (-) |
| LOC110496863 | NA | coding | upstream | 39569 | 57058537 ~ 57061029 (-) |
| LOC110496566 | hoxa2ab | coding | upstream | 48872 | 57067840 ~ 57070602 (-) |
| LOC110496565 | hoxa3ab | coding | upstream | 54494 | 57073462 ~ 57109628 (-) |
| LOC110496568 | hoxa4aa | coding | upstream | 71819 | 57090787 ~ 57094267 (-) |
| LOC110496567 | hoxa5aa | coding | upstream | 83258 | 57102226 ~ 57105455 (-) |
| G1565650 | NA | non-coding | downstream | 10649 | 57007918 ~ 57008120 (-) |
| G1565648 | NA | non-coding | downstream | 15231 | 57002962 ~ 57003538 (-) |
| G1565647 | NA | non-coding | downstream | 16141 | 57002404 ~ 57002628 (-) |
| G1565645 | NA | non-coding | downstream | 16578 | 57001969 ~ 57002191 (-) |
| G1565638 | NA | non-coding | downstream | 21104 | 56997438 ~ 56997665 (-) |
| G1565663 | NA | non-coding | upstream | 2934 | 57021902 ~ 57022419 (-) |
| G1565665 | NA | non-coding | upstream | 4193 | 57023161 ~ 57023378 (-) |
| G1565671 | NA | non-coding | upstream | 12303 | 57031271 ~ 57031471 (-) |
| G1565674 | NA | non-coding | upstream | 13441 | 57032409 ~ 57032706 (-) |
| G1565681 | NA | non-coding | upstream | 17286 | 57036254 ~ 57036491 (-) |
| G1565122 | LOC106613431 | other | downstream | 530480 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2353126 | 54660626 ~ 54665643 (-) |
| mrpl3 | mrpl3 | other | downstream | 3123820 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 1008543 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 1056655 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1148416 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1391531 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1850395 | 58869363 ~ 58870007 (-) |
