Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565746 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57106358 ~ 57106586 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791295 | True | 229 | lncRNA | 0.36 | 1 | 57106358 | 57106586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496572 | NA | coding | upstream | 7052 | 57088552 ~ 57099306 (+) |
| LOC110496570 | NA | coding | upstream | 19348 | 57085681 ~ 57087010 (+) |
| LOC110496564 | LOC106588844 | coding | upstream | 230340 | 56861497 ~ 56876018 (+) |
| LOC110496562 | LOC106588845 | coding | upstream | 256531 | 56845173 ~ 56849827 (+) |
| LOC110496561 | LOC106588843 | coding | upstream | 272869 | 56821534 ~ 56833489 (+) |
| LOC110496571 | hoxa7aa | coding | downstream | 2768 | 57109128 ~ 57112335 (+) |
| LOC110496577 | NA | coding | downstream | 30902 | 57137204 ~ 57140625 (+) |
| LOC110496950 | LOC106588852 | coding | downstream | 56539 | 57163125 ~ 57167993 (+) |
| tax1bp1a | LOC106588861 | coding | downstream | 186164 | 57292750 ~ 57336282 (+) |
| LOC110496864 | LOC106588860 | coding | downstream | 284185 | 57390771 ~ 57420005 (+) |
| G1565744 | hoxa5aa | non-coding | upstream | 3563 | 57102409 ~ 57102795 (+) |
| G1565741 | NA | non-coding | upstream | 7492 | 57098542 ~ 57098866 (+) |
| G1565731 | NA | non-coding | upstream | 18547 | 57087260 ~ 57087811 (+) |
| G1565736 | NA | non-coding | upstream | 20786 | 57085186 ~ 57085572 (+) |
| G1565747 | NA | non-coding | downstream | 174 | 57106760 ~ 57106991 (+) |
| G1565752 | NA | non-coding | downstream | 8314 | 57114900 ~ 57115405 (+) |
| G1565753 | NA | non-coding | downstream | 10053 | 57116639 ~ 57116947 (+) |
| G1565756 | hoxa10ab | non-coding | downstream | 17566 | 57124152 ~ 57125142 (+) |
| G1565672 | NA | other | upstream | 74395 | 57031621 ~ 57031963 (+) |
| LOC110496862 | LOC106588838 | other | upstream | 937155 | 56028870 ~ 56504444 (+) |
| G1564638 | LOC106607612 | other | upstream | 1054565 | 56050588 ~ 56051793 (+) |
| G1564470 | NA | other | upstream | 1197424 | 55908085 ~ 55908934 (+) |
| G1563547 | NA | other | upstream | 1967127 | 55138648 ~ 55139231 (+) |
| LOC110496591 | LOC106588881 | other | downstream | 744635 | 57851179 ~ 57870361 (+) |
| LOC110496592 | LOC106588883 | other | downstream | 810029 | 57893854 ~ 57935297 (+) |
| G1566224 | tbc1d5 | other | downstream | 834511 | 57941097 ~ 57946763 (+) |
| G1566445 | LOC106588893 | other | downstream | 1257670 | 58364256 ~ 58377006 (+) |
