Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565789 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57106845 ~ 57107370 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791354 | True | 526 | lncRNA | 0.47 | 1 | 57106845 | 57107370 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496567 | hoxa5aa | coding | downstream | 1390 | 57102226 ~ 57105455 (-) |
| LOC110496568 | hoxa4aa | coding | downstream | 12578 | 57090787 ~ 57094267 (-) |
| LOC110496566 | hoxa2ab | coding | downstream | 36243 | 57067840 ~ 57070602 (-) |
| LOC110496863 | NA | coding | downstream | 45816 | 57058537 ~ 57061029 (-) |
| LOC110496560 | LOC106588840 | coding | downstream | 369464 | 56728341 ~ 56737381 (-) |
| LOC110496573 | LOC106588846 | coding | upstream | 10098 | 57117468 ~ 57122355 (-) |
| LOC110496574 | hoxa10ab | coding | upstream | 16757 | 57124127 ~ 57130231 (-) |
| LOC110496576 | hoxa11ab | coding | upstream | 24095 | 57131465 ~ 57134795 (-) |
| LOC110496578 | hoxa13 | coding | upstream | 38779 | 57146149 ~ 57148279 (-) |
| LOC110496951 | NA | coding | upstream | 171696 | 57279066 ~ 57284390 (-) |
| LOC110496569 | hoxa7aa | non-coding | downstream | 4559 | 57101716 ~ 57114109 (-) |
| G1565781 | NA | non-coding | downstream | 30275 | 57076128 ~ 57076570 (-) |
| LOC110496565 | hoxa3ab | non-coding | downstream | 32840 | 57073462 ~ 57109628 (-) |
| G1565715 | NA | non-coding | downstream | 49749 | 57056799 ~ 57057096 (-) |
| G1565792 | NA | non-coding | upstream | 8187 | 57115557 ~ 57116585 (-) |
| G1565795 | NA | non-coding | upstream | 22107 | 57129477 ~ 57129703 (-) |
| G1565797 | NA | non-coding | upstream | 23491 | 57130861 ~ 57131087 (-) |
| G1565803 | NA | non-coding | upstream | 33747 | 57141117 ~ 57142923 (-) |
| G1565819 | NA | non-coding | upstream | 56179 | 57163549 ~ 57163778 (-) |
| G1565122 | LOC106613431 | other | downstream | 618556 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2441202 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 2453995 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 3211896 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 920141 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 968253 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1060014 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1303129 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1761993 | 58869363 ~ 58870007 (-) |
