Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565795 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57129477 ~ 57129703 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791366 | True | 227 | lncRNA | 0.34 | 1 | 57129477 | 57129703 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496573 | LOC106588846 | coding | downstream | 7122 | 57117468 ~ 57122355 (-) |
| LOC110496569 | hoxa7aa | coding | downstream | 15368 | 57101716 ~ 57114109 (-) |
| LOC110496565 | hoxa3ab | coding | downstream | 19849 | 57073462 ~ 57109628 (-) |
| LOC110496567 | hoxa5aa | coding | downstream | 24022 | 57102226 ~ 57105455 (-) |
| LOC110496568 | hoxa4aa | coding | downstream | 35210 | 57090787 ~ 57094267 (-) |
| LOC110496576 | hoxa11ab | coding | upstream | 1762 | 57131465 ~ 57134795 (-) |
| LOC110496578 | hoxa13 | coding | upstream | 16446 | 57146149 ~ 57148279 (-) |
| LOC110496951 | NA | coding | upstream | 149363 | 57279066 ~ 57284390 (-) |
| LOC110496580 | LOC106588863 | coding | upstream | 206639 | 57336342 ~ 57373792 (-) |
| LOC110496581 | LOC106588859 | coding | upstream | 290244 | 57418906 ~ 57427510 (-) |
| G1565792 | NA | non-coding | downstream | 12892 | 57115557 ~ 57116585 (-) |
| G1565789 | NA | non-coding | downstream | 22107 | 57106845 ~ 57107370 (-) |
| G1565781 | NA | non-coding | downstream | 52907 | 57076128 ~ 57076570 (-) |
| G1565797 | NA | non-coding | upstream | 1158 | 57130861 ~ 57131087 (-) |
| G1565803 | NA | non-coding | upstream | 11414 | 57141117 ~ 57142923 (-) |
| G1565819 | NA | non-coding | upstream | 33846 | 57163549 ~ 57163778 (-) |
| G1565825 | NA | non-coding | upstream | 38079 | 57167782 ~ 57168087 (-) |
| G1565856 | NA | non-coding | upstream | 75351 | 57205054 ~ 57205284 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 392130 | 56728341 ~ 56737381 (-) |
| G1565122 | LOC106613431 | other | downstream | 641188 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2463834 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 2476627 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 3234528 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 897808 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 945920 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1037681 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1280796 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1739660 | 58869363 ~ 58870007 (-) |
