G1565760


Basic Information

Item Value
gene id G1565760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57130291 ~ 57130610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791325
CCAATTGTACAAATGCTCCAGACTCTCAGACAGGTTTTATGGTCGCGTTGCTGCGGCAACGGGGAGGATGTCTAGTAATTAGGGACGGAATTCCAGCGCGCCATAAAGGATGAGCCTGGCAAGGCTAGGCCGGACTATGGCGGAGAGAGGCAACCATAAacttcagcctctctctctctgcgttaaTGGCCCATTTGACTGTCATATATGAACGCCATTGCGCTGCGGCTGGCACTCATAAACAGAGTCATAATAACAGCCAATATGGCGGTTCTCACTTAGGAAGATGTTGTGGAAGAAGGGGTGGTTTTAATCTTATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791325 True 320 lncRNA 0.49 1 57130291 57130610

Neighbor

gene id symbol gene type direction distance location
LOC110496571 hoxa7aa coding upstream 18293 57109128 ~ 57112335 (+)
LOC110496572 NA coding upstream 30985 57088552 ~ 57099306 (+)
LOC110496570 NA coding upstream 43281 57085681 ~ 57087010 (+)
LOC110496564 LOC106588844 coding upstream 254273 56861497 ~ 56876018 (+)
LOC110496562 LOC106588845 coding upstream 280464 56845173 ~ 56849827 (+)
LOC110496577 NA coding downstream 6878 57137204 ~ 57140625 (+)
LOC110496950 LOC106588852 coding downstream 32515 57163125 ~ 57167993 (+)
tax1bp1a LOC106588861 coding downstream 162140 57292750 ~ 57336282 (+)
LOC110496864 LOC106588860 coding downstream 260161 57390771 ~ 57420005 (+)
LOC110496582 LOC106588858 coding downstream 310767 57441377 ~ 57476399 (+)
G1565756 hoxa10ab non-coding upstream 5149 57124152 ~ 57125142 (+)
G1565753 NA non-coding upstream 13344 57116639 ~ 57116947 (+)
G1565752 NA non-coding upstream 14886 57114900 ~ 57115405 (+)
G1565747 NA non-coding upstream 23300 57106760 ~ 57106991 (+)
G1565839 NA non-coding downstream 45946 57176556 ~ 57176764 (+)
G1565852 NA non-coding downstream 68275 57198885 ~ 57199248 (+)
G1565858 NA non-coding downstream 82612 57213222 ~ 57213440 (+)
G1565875 NA non-coding downstream 114552 57245162 ~ 57245490 (+)
G1565672 NA other upstream 98328 57031621 ~ 57031963 (+)
LOC110496862 LOC106588838 other upstream 961088 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other upstream 1078498 56050588 ~ 56051793 (+)
G1564470 NA other upstream 1221357 55908085 ~ 55908934 (+)
LOC110496591 LOC106588881 other downstream 720611 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 786005 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 810487 57941097 ~ 57946763 (+)
G1566445 LOC106588893 other downstream 1233646 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 1740289 58864013 ~ 58873692 (+)

Expression


Co-expression Network