Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565819 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57163549 ~ 57163778 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| homeobox protein XHOX-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791394 | True | 230 | lncRNA | 0.47 | 1 | 57163549 | 57163778 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496578 | hoxa13 | coding | downstream | 15270 | 57146149 ~ 57148279 (-) |
| LOC110496576 | hoxa11ab | coding | downstream | 28754 | 57131465 ~ 57134795 (-) |
| LOC110496574 | hoxa10ab | coding | downstream | 33318 | 57124127 ~ 57130231 (-) |
| LOC110496573 | LOC106588846 | coding | downstream | 41194 | 57117468 ~ 57122355 (-) |
| LOC110496569 | hoxa7aa | coding | downstream | 49440 | 57101716 ~ 57114109 (-) |
| LOC110496951 | NA | coding | upstream | 115288 | 57279066 ~ 57284390 (-) |
| LOC110496580 | LOC106588863 | coding | upstream | 172564 | 57336342 ~ 57373792 (-) |
| LOC110496581 | LOC106588859 | coding | upstream | 256169 | 57418906 ~ 57427510 (-) |
| LOC110496865 | LOC106588853 | coding | upstream | 332861 | 57496639 ~ 57567805 (-) |
| LOC110496583 | LOC100380778 | coding | upstream | 413635 | 57577413 ~ 57580463 (-) |
| G1565803 | NA | non-coding | downstream | 20626 | 57141117 ~ 57142923 (-) |
| G1565797 | NA | non-coding | downstream | 32462 | 57130861 ~ 57131087 (-) |
| G1565795 | NA | non-coding | downstream | 33846 | 57129477 ~ 57129703 (-) |
| G1565792 | NA | non-coding | downstream | 46964 | 57115557 ~ 57116585 (-) |
| G1565789 | NA | non-coding | downstream | 56179 | 57106845 ~ 57107370 (-) |
| G1565825 | NA | non-coding | upstream | 4004 | 57167782 ~ 57168087 (-) |
| G1565856 | NA | non-coding | upstream | 41276 | 57205054 ~ 57205284 (-) |
| G1565864 | NA | non-coding | upstream | 52267 | 57216045 ~ 57218817 (-) |
| G1565879 | NA | non-coding | upstream | 86237 | 57250015 ~ 57250228 (-) |
| G1565881 | NA | non-coding | upstream | 86494 | 57250272 ~ 57250535 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 426202 | 56728341 ~ 56737381 (-) |
| G1565122 | LOC106613431 | other | downstream | 675260 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2497906 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 2510699 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 3268600 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 863733 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 911845 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 1003606 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1246721 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1705585 | 58869363 ~ 58870007 (-) |
