Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57176556 ~ 57176764 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791414 | True | 209 | lncRNA | 0.49 | 1 | 57176556 | 57176764 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496950 | LOC106588852 | coding | upstream | 8563 | 57163125 ~ 57167993 (+) |
| LOC110496577 | NA | coding | upstream | 35933 | 57137204 ~ 57140625 (+) |
| LOC110496571 | hoxa7aa | coding | upstream | 64558 | 57109128 ~ 57112335 (+) |
| LOC110496572 | NA | coding | upstream | 77250 | 57088552 ~ 57099306 (+) |
| LOC110496570 | NA | coding | upstream | 89546 | 57085681 ~ 57087010 (+) |
| tax1bp1a | LOC106588861 | coding | downstream | 115986 | 57292750 ~ 57336282 (+) |
| LOC110496864 | LOC106588860 | coding | downstream | 214007 | 57390771 ~ 57420005 (+) |
| LOC110496582 | LOC106588858 | coding | downstream | 264613 | 57441377 ~ 57476399 (+) |
| LOC118941191 | LOC106588856 | coding | downstream | 303740 | 57480504 ~ 57495218 (+) |
| LOC110496585 | LOC106588871 | coding | downstream | 451673 | 57628437 ~ 57632714 (+) |
| G1565760 | NA | non-coding | upstream | 45946 | 57130291 ~ 57130610 (+) |
| G1565756 | hoxa10ab | non-coding | upstream | 51414 | 57124152 ~ 57125142 (+) |
| G1565753 | NA | non-coding | upstream | 59609 | 57116639 ~ 57116947 (+) |
| G1565752 | NA | non-coding | upstream | 61151 | 57114900 ~ 57115405 (+) |
| G1565852 | NA | non-coding | downstream | 22121 | 57198885 ~ 57199248 (+) |
| G1565858 | NA | non-coding | downstream | 36458 | 57213222 ~ 57213440 (+) |
| G1565875 | NA | non-coding | downstream | 68398 | 57245162 ~ 57245490 (+) |
| G1565877 | NA | non-coding | downstream | 70857 | 57247621 ~ 57247981 (+) |
| G1565889 | NA | non-coding | downstream | 83746 | 57260510 ~ 57260754 (+) |
| G1565672 | NA | other | upstream | 144593 | 57031621 ~ 57031963 (+) |
| LOC110496862 | LOC106588838 | other | upstream | 1007353 | 56028870 ~ 56504444 (+) |
| G1564638 | LOC106607612 | other | upstream | 1124763 | 56050588 ~ 56051793 (+) |
| G1564470 | NA | other | upstream | 1267622 | 55908085 ~ 55908934 (+) |
| LOC110496591 | LOC106588881 | other | downstream | 674457 | 57851179 ~ 57870361 (+) |
| LOC110496592 | LOC106588883 | other | downstream | 739851 | 57893854 ~ 57935297 (+) |
| G1566224 | tbc1d5 | other | downstream | 764333 | 57941097 ~ 57946763 (+) |
| G1566445 | LOC106588893 | other | downstream | 1187492 | 58364256 ~ 58377006 (+) |
| LOC110496618 | LOC106588914 | other | downstream | 1694135 | 58864013 ~ 58873692 (+) |
