G1565852


Basic Information

Item Value
gene id G1565852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57198885 ~ 57199248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791427
acttgcgtactattgtttgtacagatgaacgtggtaccttcaggcatttggaaattgctcccaaggatgaaccaaacttgtggaggtctacaatttttttctgaggtcttggctgatttattttggttttcccatgatgtcaagcaaagaggcacagagtttgaaggtaggccttgaaatacatccacaggtacacctccagttgactcaaattatgtcaattagcctatcagaagcttctaaagccatgacatcattttctggaattttccaagctgtttaaaggcacagtcaacttagtgtaactccacaaagtagatatccttaccgacttgccaaaattatagattgttaacaagtaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791427 True 364 lncRNA 0.39 1 57198885 57199248

Neighbor

gene id symbol gene type direction distance location
LOC110496950 LOC106588852 coding upstream 30892 57163125 ~ 57167993 (+)
LOC110496577 NA coding upstream 58262 57137204 ~ 57140625 (+)
LOC110496571 hoxa7aa coding upstream 86887 57109128 ~ 57112335 (+)
LOC110496572 NA coding upstream 99579 57088552 ~ 57099306 (+)
LOC110496570 NA coding upstream 111875 57085681 ~ 57087010 (+)
tax1bp1a LOC106588861 coding downstream 93502 57292750 ~ 57336282 (+)
LOC110496864 LOC106588860 coding downstream 191523 57390771 ~ 57420005 (+)
LOC110496582 LOC106588858 coding downstream 242129 57441377 ~ 57476399 (+)
LOC118941191 LOC106588856 coding downstream 281256 57480504 ~ 57495218 (+)
LOC110496585 LOC106588871 coding downstream 429189 57628437 ~ 57632714 (+)
G1565839 NA non-coding upstream 22121 57176556 ~ 57176764 (+)
G1565760 NA non-coding upstream 68275 57130291 ~ 57130610 (+)
G1565756 hoxa10ab non-coding upstream 73743 57124152 ~ 57125142 (+)
G1565753 NA non-coding upstream 81938 57116639 ~ 57116947 (+)
G1565858 NA non-coding downstream 13974 57213222 ~ 57213440 (+)
G1565875 NA non-coding downstream 45914 57245162 ~ 57245490 (+)
G1565877 NA non-coding downstream 48373 57247621 ~ 57247981 (+)
G1565889 NA non-coding downstream 61262 57260510 ~ 57260754 (+)
G1565890 NA non-coding downstream 61522 57260770 ~ 57261110 (+)
G1565672 NA other upstream 166922 57031621 ~ 57031963 (+)
LOC110496862 LOC106588838 other upstream 1029682 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other upstream 1147092 56050588 ~ 56051793 (+)
G1564470 NA other upstream 1289951 55908085 ~ 55908934 (+)
LOC110496591 LOC106588881 other downstream 651973 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 717367 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 741849 57941097 ~ 57946763 (+)
G1566445 LOC106588893 other downstream 1165008 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 1671651 58864013 ~ 58873692 (+)

Expression


Co-expression Network