G1565890


Basic Information

Item Value
gene id G1565890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57260770 ~ 57261110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791468
cttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattacattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791468 True 341 lncRNA 0.43 1 57260770 57261110

Neighbor

gene id symbol gene type direction distance location
LOC110496950 LOC106588852 coding upstream 92777 57163125 ~ 57167993 (+)
LOC110496577 NA coding upstream 120147 57137204 ~ 57140625 (+)
LOC110496571 hoxa7aa coding upstream 148772 57109128 ~ 57112335 (+)
LOC110496572 NA coding upstream 161464 57088552 ~ 57099306 (+)
LOC110496570 NA coding upstream 173760 57085681 ~ 57087010 (+)
tax1bp1a LOC106588861 coding downstream 31640 57292750 ~ 57336282 (+)
LOC110496864 LOC106588860 coding downstream 129661 57390771 ~ 57420005 (+)
LOC110496582 LOC106588858 coding downstream 180267 57441377 ~ 57476399 (+)
LOC118941191 LOC106588856 coding downstream 219394 57480504 ~ 57495218 (+)
LOC110496585 LOC106588871 coding downstream 367327 57628437 ~ 57632714 (+)
G1565889 NA non-coding upstream 16 57260510 ~ 57260754 (+)
G1565877 NA non-coding upstream 12789 57247621 ~ 57247981 (+)
G1565875 NA non-coding upstream 15280 57245162 ~ 57245490 (+)
G1565858 NA non-coding upstream 47330 57213222 ~ 57213440 (+)
G1565852 NA non-coding upstream 61522 57198885 ~ 57199248 (+)
G1565927 NA non-coding downstream 56412 57317522 ~ 57318947 (+)
G1565906 NA non-coding downstream 64473 57325583 ~ 57325983 (+)
G1565958 NA non-coding downstream 118543 57379653 ~ 57386702 (+)
G1565977 NA non-coding downstream 168382 57429492 ~ 57429785 (+)
G1565938 NA non-coding downstream 178607 57439717 ~ 57441240 (+)
G1565672 NA other upstream 228807 57031621 ~ 57031963 (+)
LOC110496862 LOC106588838 other upstream 1091567 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other upstream 1208977 56050588 ~ 56051793 (+)
G1564470 NA other upstream 1351836 55908085 ~ 55908934 (+)
LOC110496591 LOC106588881 other downstream 590111 57851179 ~ 57870361 (+)
LOC110496592 LOC106588883 other downstream 655505 57893854 ~ 57935297 (+)
G1566224 tbc1d5 other downstream 679987 57941097 ~ 57946763 (+)
G1566445 LOC106588893 other downstream 1103146 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 1609789 58864013 ~ 58873692 (+)

Expression


Co-expression Network