Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565893 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57269338 ~ 57269639 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein Flattop isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791471 | True | 302 | lncRNA | 0.49 | 1 | 57269338 | 57269639 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496578 | hoxa13 | coding | downstream | 121059 | 57146149 ~ 57148279 (-) |
| LOC110496576 | hoxa11ab | coding | downstream | 134543 | 57131465 ~ 57134795 (-) |
| LOC110496574 | hoxa10ab | coding | downstream | 139107 | 57124127 ~ 57130231 (-) |
| LOC110496573 | LOC106588846 | coding | downstream | 146983 | 57117468 ~ 57122355 (-) |
| LOC110496569 | hoxa7aa | coding | downstream | 155229 | 57101716 ~ 57114109 (-) |
| LOC110496951 | NA | coding | upstream | 9427 | 57279066 ~ 57284390 (-) |
| LOC110496580 | LOC106588863 | coding | upstream | 66703 | 57336342 ~ 57373792 (-) |
| LOC110496581 | LOC106588859 | coding | upstream | 150308 | 57418906 ~ 57427510 (-) |
| LOC110496865 | LOC106588853 | coding | upstream | 227000 | 57496639 ~ 57567805 (-) |
| LOC110496583 | LOC100380778 | coding | upstream | 307774 | 57577413 ~ 57580463 (-) |
| G1565881 | NA | non-coding | downstream | 18803 | 57250272 ~ 57250535 (-) |
| G1565879 | NA | non-coding | downstream | 19110 | 57250015 ~ 57250228 (-) |
| G1565864 | NA | non-coding | downstream | 50521 | 57216045 ~ 57218817 (-) |
| G1565856 | NA | non-coding | downstream | 64054 | 57205054 ~ 57205284 (-) |
| G1565825 | NA | non-coding | downstream | 101251 | 57167782 ~ 57168087 (-) |
| G1566539 | NA | non-coding | upstream | 107671 | 57377310 ~ 57377520 (-) |
| G1566546 | NA | non-coding | upstream | 117161 | 57386800 ~ 57387043 (-) |
| G1566547 | NA | non-coding | upstream | 117767 | 57387406 ~ 57387641 (-) |
| G1566553 | NA | non-coding | upstream | 123304 | 57392943 ~ 57395443 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 531991 | 56728341 ~ 56737381 (-) |
| G1565122 | LOC106613431 | other | downstream | 781049 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2603695 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 2616488 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 3374389 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 757872 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 805984 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 897745 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 1140860 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1599724 | 58869363 ~ 58870007 (-) |
