Gene
RNA
| Item | Value |
|---|---|
| gene id | G1565977 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57429492 ~ 57429785 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791572 | True | 294 | lncRNA | 0.38 | 1 | 57429492 | 57429785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496864 | LOC106588860 | coding | upstream | 9487 | 57390771 ~ 57420005 (+) |
| tax1bp1a | LOC106588861 | coding | upstream | 93210 | 57292750 ~ 57336282 (+) |
| LOC110496950 | LOC106588852 | coding | upstream | 261499 | 57163125 ~ 57167993 (+) |
| LOC110496577 | NA | coding | upstream | 288869 | 57137204 ~ 57140625 (+) |
| LOC110496571 | hoxa7aa | coding | upstream | 317494 | 57109128 ~ 57112335 (+) |
| LOC110496582 | LOC106588858 | coding | downstream | 11592 | 57441377 ~ 57476399 (+) |
| LOC118941191 | LOC106588856 | coding | downstream | 50719 | 57480504 ~ 57495218 (+) |
| LOC110496585 | LOC106588871 | coding | downstream | 198652 | 57628437 ~ 57632714 (+) |
| tra2a | LOC106588872 | coding | downstream | 212900 | 57642685 ~ 57648819 (+) |
| LOC110496587 | LOC106588873 | coding | downstream | 227280 | 57657065 ~ 57694865 (+) |
| G1565958 | NA | non-coding | upstream | 42790 | 57379653 ~ 57386702 (+) |
| G1565906 | NA | non-coding | upstream | 103509 | 57325583 ~ 57325983 (+) |
| G1565927 | NA | non-coding | upstream | 110545 | 57317522 ~ 57318947 (+) |
| G1565890 | NA | non-coding | upstream | 168382 | 57260770 ~ 57261110 (+) |
| G1565889 | NA | non-coding | upstream | 168738 | 57260510 ~ 57260754 (+) |
| G1565938 | NA | non-coding | downstream | 9932 | 57439717 ~ 57441240 (+) |
| G1566024 | NA | non-coding | downstream | 90253 | 57520038 ~ 57520867 (+) |
| G1566109 | NA | non-coding | downstream | 225488 | 57655273 ~ 57655494 (+) |
| G1566158 | LOC106570535 | non-coding | downstream | 338601 | 57768386 ~ 57769136 (+) |
| G1566194 | NA | non-coding | downstream | 391825 | 57821610 ~ 57885127 (+) |
| G1565672 | NA | other | upstream | 397529 | 57031621 ~ 57031963 (+) |
| LOC110496862 | LOC106588838 | other | upstream | 1260289 | 56028870 ~ 56504444 (+) |
| G1564638 | LOC106607612 | other | upstream | 1377699 | 56050588 ~ 56051793 (+) |
| G1564470 | NA | other | upstream | 1520558 | 55908085 ~ 55908934 (+) |
| LOC110496591 | LOC106588881 | other | downstream | 421436 | 57851179 ~ 57870361 (+) |
| LOC110496592 | LOC106588883 | other | downstream | 486830 | 57893854 ~ 57935297 (+) |
| G1566224 | tbc1d5 | other | downstream | 511312 | 57941097 ~ 57946763 (+) |
| G1566445 | LOC106588893 | other | downstream | 934471 | 58364256 ~ 58377006 (+) |
| LOC110496618 | LOC106588914 | other | downstream | 1441114 | 58864013 ~ 58873692 (+) |
