G1566568


Basic Information

Item Value
gene id G1566568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57439678 ~ 57441583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1792249
CCAAAAGCAAGAGACGAGGCGAGAACTGTGTCGCtgcaattcagaaagtaaacattTGGATATGCCTAAATAGGAAATTGAATACAACAATCGCTTACACGTTTGAGATGAAAACTGCAGTGAATTAAATCCAGCACAAATTGAAGGAAGTATTACTCCATGGCTTGCTGTGTGAATGAATGCTGAGGCTGGGATGCCTTTTGGTCCAATGACTCGCGAGTAAAAAGAGGAAATGGCACTCAACCGGCAGTGACGTGGTAAAAAACGTAGACATTTCCAGGTGGTACGATCAAATATTGAAATAATTTAAGAACTGGAGACTGCGTGCAACATATCAGACCGTTGTTTTCAAGGTAATCTGTTCTCGTAAAGTCTTCGCATAAATGTATATTGATCAGCATTCCGTTGTTGCAGTGGCGTGGTGAGGAAGACTATGCAGAGGGCTCCTGtacatttgtaaatattttgttttaattattttGATTGCATTTTTAAGCAATTATTTGTTTTTGTGACTTCTTGAATTTTCTTAATATTGGGTGGTTTTGTCCAATGGAGTTGCTGGACTAATGGCACGACATTTTTGTTTTCGTCTTGGCTAGGTGGTTAGGTAGCTGGTTATTCAATCATTTGAATGACGCATCAATACAGCATAAGCTGATTTTTTTATTGCATCAACGATGTggacttgtgcatgtgacattaaacaTTTTAAACTTGAGAGGGCCCACCTCATTGGGAACTGTTTCCTGACTACTGCCTATGTGTGGTGATCTTTCTGGCGCTTATAGCTGCCAagcatcacccaggtgggtgctacacTTCAGTAGTGGACTATCCAGCCTacctacagaggaggaggagacaacaGACGAGGTGCCTGATGAAGATCTCTGGGCTTGTCTAAGTAATTGACTGACACTGCTCCCTCTCTGTGCCATCGAAGCTCCCTCCTCGTAAACTACTGCCCAGCCTTTCTGAACTGCCTGTCTGAACATGACGTTATCATCTGAATCTGTGGAAGACCATCGCCCAAGACCTGACAGATCTctacatttgttttgtttgtttttacaggGTCTTTGAGATTCTCTTTAATGAAAAGCGcaatataaaatacatgtattactATTAGAAACAGGTCTTGGGCGGTTGCGCACAGGGAGCAGCGCAACCAGCGGCGACGTCATCCAAAAACATGACATTTTTGGATGAATATAAAATGTTAATATCTTCGTTGTGAGtgatacattattttatttttttgtcctcAGCGTCAATTATTTGAATAATTGAATGGGTATTTTGTGcactagtgtaacggatgtgaaatggctagcttagttagcggtggtgcgcactaaatagcgtttcaatcggtgacgtcacttgctctgagaccttgaagtagtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgtgggtgactgttgttgatgtgtgcagagggtccgtGGTTCGAGCCCGGGCGAGGGGATggtttaaagttatactgttacactaagtCATGACTAAAATGTGTTTTTAGGACTTTTAAAATCTGACTTCTCTGGGGCTCccgtctaaggcattgcatctgtgctagaggcatcactacagacaccctggtttgaatccaggctgtatcgcaaccagctgtgattgggagtcccatatggtggtgcacaattggcccaagcgtcgtccgggtttggtcggtgtaggccgccattgtaaatatgaattagttcttaactgacttgcctagttaaataataaacaaatgtGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1792249 True 1820 lncRNA 0.43 2 57439678 57441583

Neighbor

gene id symbol gene type direction distance location
LOC110496581 LOC106588859 coding downstream 13675 57418906 ~ 57427510 (-)
LOC110496580 LOC106588863 coding downstream 65886 57336342 ~ 57373792 (-)
LOC110496951 NA coding downstream 155288 57279066 ~ 57284390 (-)
LOC110496578 hoxa13 coding downstream 291399 57146149 ~ 57148279 (-)
LOC110496576 hoxa11ab coding downstream 304883 57131465 ~ 57134795 (-)
LOC110496865 LOC106588853 coding upstream 55056 57496639 ~ 57567805 (-)
LOC110496583 LOC100380778 coding upstream 135830 57577413 ~ 57580463 (-)
fam221a fam221a coding upstream 157705 57599288 ~ 57628309 (-)
LOC118941192 NA coding upstream 211191 57652774 ~ 57656815 (-)
LOC110496588 LOC106588875 coding upstream 257531 57699114 ~ 57715653 (-)
G1566553 NA non-coding downstream 44235 57392943 ~ 57395443 (-)
G1566547 NA non-coding downstream 52037 57387406 ~ 57387641 (-)
G1566546 NA non-coding downstream 52635 57386800 ~ 57387043 (-)
G1566539 NA non-coding downstream 62158 57377310 ~ 57377520 (-)
G1566579 NA non-coding upstream 9343 57450926 ~ 57451532 (-)
G1566620 NA non-coding upstream 76557 57518140 ~ 57518694 (-)
G1566645 NA non-coding upstream 142500 57584083 ~ 57584406 (-)
G1566660 ccdc126 non-coding upstream 189152 57630735 ~ 57631601 (-)
G1566667 LOC106588871 non-coding upstream 190194 57631777 ~ 57633115 (-)
LOC110496560 LOC106588840 other downstream 702331 56728341 ~ 56737381 (-)
G1565122 LOC106613431 other downstream 951389 56481468 ~ 56488289 (-)
G1563253 NA other downstream 2774035 54660626 ~ 54665643 (-)
LOC110496860 LOC106588819 other downstream 2786828 54636849 ~ 54652932 (-)
mrpl3 mrpl3 other downstream 3544729 53887137 ~ 53895002 (-)
G1566899 NA other upstream 585928 58027511 ~ 58027790 (-)
G1566923 NA other upstream 634040 58074209 ~ 58078146 (-)
G1566972 NA other upstream 725801 58167384 ~ 58167697 (-)
G1567080 NA other upstream 968916 58410499 ~ 58411129 (-)
G1567875 NA other upstream 1427780 58869363 ~ 58870007 (-)

Expression


Co-expression Network