Gene
RNA
| Item | Value |
|---|---|
| gene id | G1566579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57450926 ~ 57451532 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interphotoreceptor matrix proteoglycan 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1792262 | True | 559 | lncRNA | 0.47 | 2 | 57450926 | 57451532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496581 | LOC106588859 | coding | downstream | 24923 | 57418906 ~ 57427510 (-) |
| LOC110496580 | LOC106588863 | coding | downstream | 77134 | 57336342 ~ 57373792 (-) |
| LOC110496951 | NA | coding | downstream | 166536 | 57279066 ~ 57284390 (-) |
| LOC110496578 | hoxa13 | coding | downstream | 302647 | 57146149 ~ 57148279 (-) |
| LOC110496576 | hoxa11ab | coding | downstream | 316131 | 57131465 ~ 57134795 (-) |
| LOC110496865 | LOC106588853 | coding | upstream | 45107 | 57496639 ~ 57567805 (-) |
| LOC110496583 | LOC100380778 | coding | upstream | 125881 | 57577413 ~ 57580463 (-) |
| fam221a | fam221a | coding | upstream | 147756 | 57599288 ~ 57628309 (-) |
| LOC118941192 | NA | coding | upstream | 201242 | 57652774 ~ 57656815 (-) |
| LOC110496588 | LOC106588875 | coding | upstream | 247582 | 57699114 ~ 57715653 (-) |
| G1566568 | NA | non-coding | downstream | 9343 | 57439678 ~ 57441583 (-) |
| G1566553 | NA | non-coding | downstream | 55483 | 57392943 ~ 57395443 (-) |
| G1566547 | NA | non-coding | downstream | 63285 | 57387406 ~ 57387641 (-) |
| G1566546 | NA | non-coding | downstream | 63883 | 57386800 ~ 57387043 (-) |
| G1566620 | NA | non-coding | upstream | 66608 | 57518140 ~ 57518694 (-) |
| G1566645 | NA | non-coding | upstream | 132551 | 57584083 ~ 57584406 (-) |
| G1566660 | ccdc126 | non-coding | upstream | 179203 | 57630735 ~ 57631601 (-) |
| G1566667 | LOC106588871 | non-coding | upstream | 180245 | 57631777 ~ 57633115 (-) |
| G1566683 | NA | non-coding | upstream | 191207 | 57642739 ~ 57644028 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 713579 | 56728341 ~ 56737381 (-) |
| G1565122 | LOC106613431 | other | downstream | 962637 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 2785283 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 2798076 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 3555977 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 575979 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 624091 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 715852 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 958967 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1417831 | 58869363 ~ 58870007 (-) |
